BLASTX nr result

ID: Scutellaria24_contig00024489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024489
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   127   1e-27
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   124   8e-27
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   122   3e-26
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   109   2e-22

>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/89 (61%), Positives = 74/89 (83%)
 Frame = -1

Query: 267 HSQIGSVMYLFRGEFGSMLFTGDFRWESSGEKVENGRAMLLDSLKSDPLDMLYLDNFFCN 88
           H   G+VMYLFRG+FG MLFTGDFRWE++ E+ + GR MLL +L+ D +++LYLDN +CN
Sbjct: 94  HHCPGAVMYLFRGDFGCMLFTGDFRWEATNERAKIGRTMLLHALEGDRVNILYLDNTYCN 153

Query: 87  PQYAFPPRQVSAKQIVDIIASHPKHDIVI 1
           P ++FP R+ +A+Q+VDIIASHPKHDI+I
Sbjct: 154 PSFSFPSREAAAQQVVDIIASHPKHDIII 182


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/89 (60%), Positives = 72/89 (80%)
 Frame = -1

Query: 267 HSQIGSVMYLFRGEFGSMLFTGDFRWESSGEKVENGRAMLLDSLKSDPLDMLYLDNFFCN 88
           H   G+VM LFRG+FG +L+TGDFRWE S E+   GR  LL++L+ + +D+LYLDN +CN
Sbjct: 94  HHCPGAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRIALLNALEDNTVDVLYLDNTYCN 153

Query: 87  PQYAFPPRQVSAKQIVDIIASHPKHDIVI 1
           P YAFP R+++A+QIVDIIASHP+HDI+I
Sbjct: 154 PSYAFPSREIAARQIVDIIASHPQHDIII 182


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/89 (60%), Positives = 72/89 (80%)
 Frame = -1

Query: 267 HSQIGSVMYLFRGEFGSMLFTGDFRWESSGEKVENGRAMLLDSLKSDPLDMLYLDNFFCN 88
           H   G+VM LFRG+FG +L+TGDFRWE++ E+ + G  MLL++LK D +D+LYLDN +CN
Sbjct: 94  HHCPGAVMLLFRGDFGCLLYTGDFRWEATSERGKIGSNMLLNALKDDSVDILYLDNTYCN 153

Query: 87  PQYAFPPRQVSAKQIVDIIASHPKHDIVI 1
           P + FPPR V+A+Q+VDIIASHP HDI+I
Sbjct: 154 PSFDFPPRHVAARQVVDIIASHPGHDIII 182


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/89 (56%), Positives = 71/89 (79%)
 Frame = -1

Query: 267 HSQIGSVMYLFRGEFGSMLFTGDFRWESSGEKVENGRAMLLDSLKSDPLDMLYLDNFFCN 88
           H   G VM+LFRGEFG +++TGDF+WE   ++ ++ R+ LL+ LK++ +D+LYLDN +CN
Sbjct: 87  HHCPGVVMFLFRGEFGCLMYTGDFQWEVDSKRAKDARSRLLNVLKNETVDVLYLDNTYCN 146

Query: 87  PQYAFPPRQVSAKQIVDIIASHPKHDIVI 1
           P Y FP R+V+A+Q+VDIIASH +HDIVI
Sbjct: 147 PSYDFPTREVAAQQVVDIIASHLEHDIVI 175


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/89 (53%), Positives = 67/89 (75%)
 Frame = -1

Query: 267 HSQIGSVMYLFRGEFGSMLFTGDFRWESSGEKVENGRAMLLDSLKSDPLDMLYLDNFFCN 88
           H   GS+M+LFRG+FG  L+TGDFRW++     +  R +L+D++   P+D+LYLDN +CN
Sbjct: 94  HHCPGSMMFLFRGDFGCFLYTGDFRWDADAS--DEARTILVDAIHEFPVDILYLDNTYCN 151

Query: 87  PQYAFPPRQVSAKQIVDIIASHPKHDIVI 1
           P Y+FP RQV+A+ + DIIASHP HDI+I
Sbjct: 152 PIYSFPSRQVAAQLVADIIASHPSHDIII 180


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