BLASTX nr result
ID: Scutellaria24_contig00024488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00024488
(940 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi... 140 3e-31
ref|XP_003613018.1| Pentatricopeptide repeat-containing protein ... 127 5e-27
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera] 125 2e-26
ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi... 120 4e-25
ref|XP_002326370.1| predicted protein [Populus trichocarpa] gi|2... 120 6e-25
>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
protein product [Vitis vinifera]
Length = 890
Score = 140 bits (354), Expect = 3e-31
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +1
Query: 10 YEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKI 189
Y +A+ L+DAM+ GL P LESYKLLVCGLY +GS+E AK FH LL CGYNYDEV WK+
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 847
Query: 190 LIDGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGI 309
LIDGLLKR V++CSEL+DIME+ GC NP T S+L +G+
Sbjct: 848 LIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = +1
Query: 1 VKKYEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVV 180
V E A L+ M GL P +Y + + L ++G E A T F + G +EV+
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 181 WKILIDGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGILDQR 321
+ LIDG K G ++ L++ M D C+ N +T +VL +G+ ++
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Score = 56.6 bits (135), Expect = 8e-06
Identities = 29/102 (28%), Positives = 53/102 (51%)
Frame = +1
Query: 16 DAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKILI 195
+A+NL + M +G P++ +Y +L+ GL ++ + A+ + G V + LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 196 DGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGILDQR 321
DG K G ++ E++D+ME + C N T + L G+ +R
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
>ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 894
Score = 127 bits (318), Expect = 5e-27
Identities = 55/98 (56%), Positives = 78/98 (79%)
Frame = +1
Query: 10 YEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKI 189
+E+A+ L+D+M+ HLESYKLLVCGL+E+G+ E A+ F LL CGYNYDEVVWK+
Sbjct: 792 HEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKV 851
Query: 190 LIDGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSK 303
L+DGL+++G+V++CS+L DIMEK GC L+ T ++LS+
Sbjct: 852 LLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889
>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 125 bits (313), Expect = 2e-26
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +1
Query: 10 YEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKI 189
Y +A+ L+DAM+ GL P LESYKLLVCGLY +GS+E AK FH LL CGYNYDEV WK+
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 858
Query: 190 LIDGLLKRGFVNKCSELVDIMEK 258
LIDGLLKR V++CSEL+DIME+
Sbjct: 859 LIDGLLKRDLVDECSELIDIMEE 881
Score = 57.4 bits (137), Expect = 5e-06
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = +1
Query: 1 VKKYEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVV 180
V E A L+ M GL P +Y + + L ++G E A T F + G +EV+
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 181 WKILIDGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGILDQR 321
+ LIDG K G ++ L++ M D C+ N +T +VL +G+ ++
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Score = 56.6 bits (135), Expect = 8e-06
Identities = 29/102 (28%), Positives = 53/102 (51%)
Frame = +1
Query: 16 DAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKILI 195
+A+NL + M +G P++ +Y +L+ GL ++ + A+ + G V + LI
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 196 DGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGILDQR 321
DG K G ++ E++D+ME + C N T + L G+ +R
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
[Glycine max]
Length = 892
Score = 120 bits (302), Expect = 4e-25
Identities = 53/96 (55%), Positives = 74/96 (77%)
Frame = +1
Query: 10 YEDAMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKI 189
+ +A+ L+D+M+ HLESYKLL+CGL+E+ + E A+ F LL CGYNYDEV WK+
Sbjct: 790 FGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKV 849
Query: 190 LIDGLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVL 297
LIDGL K G+V++CSEL+++MEK+GC L+P T S+L
Sbjct: 850 LIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSML 885
>ref|XP_002326370.1| predicted protein [Populus trichocarpa] gi|222833563|gb|EEE72040.1|
predicted protein [Populus trichocarpa]
Length = 107
Score = 120 bits (300), Expect = 6e-25
Identities = 59/104 (56%), Positives = 74/104 (71%)
Frame = +1
Query: 19 AMNLIDAMLRQGLFPHLESYKLLVCGLYEKGSDENAKTTFHRLLHCGYNYDEVVWKILID 198
A L++AM+ G P LES KLL+CGLY++G +E AK F LL CGYNYDEV WKILID
Sbjct: 5 AARLVEAMMEHGHLPLLESCKLLLCGLYDEGENEKAKAVFVHLLLCGYNYDEVAWKILID 64
Query: 199 GLLKRGFVNKCSELVDIMEKDGCMLNPHTQSVLSKGILDQRVGT 330
GLLK G ++CSEL+ +MEK GC ++P T + L +G LD GT
Sbjct: 65 GLLKSGLADRCSELLSVMEKRGCQIDPLTYTKLIEG-LDGSHGT 107