BLASTX nr result

ID: Scutellaria24_contig00024441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024441
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526000.1| cleavage and polyadenylation specificity fac...   216   6e-54
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   211   2e-52
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              211   2e-52
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
gb|AFK42005.1| unknown [Medicago truncatula]                          204   3e-50

>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223534732|gb|EEF36424.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 963

 Score =  216 bits (550), Expect = 6e-54
 Identities = 107/144 (74%), Positives = 123/144 (85%)
 Frame = -1

Query: 958 GMISGGFSLEVFRQWAPYEENLVTLPGYCVAGTVGHRLLSAKIPTQITLEENVQIDVRCQ 779
           GMISGGFSLEVF++WAP E NLVTLPGYCVAGT+GH+L+S K P++I L+++ QIDVRCQ
Sbjct: 325 GMISGGFSLEVFKRWAPCEMNLVTLPGYCVAGTIGHKLMSGK-PSKINLDKDTQIDVRCQ 383

Query: 778 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLAEKIQSELAIQCSYPANNQT 599
           IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM  L E+IQSEL IQC  PAN +T
Sbjct: 384 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKERIQSELEIQCYVPANCET 443

Query: 598 VCISSTTHDHIHARASDAFLESCL 527
           +CI ST    + A AS+AF+ SCL
Sbjct: 444 LCIPSTL--FVKADASEAFIRSCL 465


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  211 bits (537), Expect = 2e-52
 Identities = 108/158 (68%), Positives = 126/158 (79%)
 Frame = -1

Query: 958  GMISGGFSLEVFRQWAPYEENLVTLPGYCVAGTVGHRLLSAKIPTQITLEENVQIDVRCQ 779
            GMISGGFSLEVF+ WAP E NLVTLPGYC+AGT+GH+L + K PT+I L++++QI VRCQ
Sbjct: 1574 GMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQ 1632

Query: 778  IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLAEKIQSELAIQCSYPANNQT 599
            IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM  L  KI+S+L IQC YPANN T
Sbjct: 1633 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDT 1692

Query: 598  VCISSTTHDHIHARASDAFLESCLLCQNLKSLRTINEE 485
            VCI ST    + A  S  F+ S  L  N K ++TI+E+
Sbjct: 1693 VCIPSTC--WLKADTSKTFIRSS-LNPNFKFVKTISED 1727


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  211 bits (537), Expect = 2e-52
 Identities = 108/158 (68%), Positives = 126/158 (79%)
 Frame = -1

Query: 958 GMISGGFSLEVFRQWAPYEENLVTLPGYCVAGTVGHRLLSAKIPTQITLEENVQIDVRCQ 779
           GMISGGFSLEVF+ WAP E NLVTLPGYC+AGT+GH+L + K PT+I L++++QI VRCQ
Sbjct: 380 GMISGGFSLEVFKLWAPSEMNLVTLPGYCLAGTIGHKLTTGK-PTKIDLDKDIQISVRCQ 438

Query: 778 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLAEKIQSELAIQCSYPANNQT 599
           IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM  L  KI+S+L IQC YPANN T
Sbjct: 439 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMASLKGKIESDLGIQCYYPANNDT 498

Query: 598 VCISSTTHDHIHARASDAFLESCLLCQNLKSLRTINEE 485
           VCI ST    + A  S  F+ S  L  N K ++TI+E+
Sbjct: 499 VCIPSTC--WLKADTSKTFIRSS-LNPNFKFVKTISED 533


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  204 bits (520), Expect = 2e-50
 Identities = 102/144 (70%), Positives = 119/144 (82%)
 Frame = -1

Query: 958 GMISGGFSLEVFRQWAPYEENLVTLPGYCVAGTVGHRLLSAKIPTQITLEENVQIDVRCQ 779
           GMISGGFSLEVF+QWAP E NL+TLPGYCVAGTVGH+L+S K PT+I L+++ QIDVRCQ
Sbjct: 325 GMISGGFSLEVFKQWAPCEMNLITLPGYCVAGTVGHKLMSGK-PTKINLDKDTQIDVRCQ 383

Query: 778 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLAEKIQSELAIQCSYPANNQT 599
           IHQLSFSPHTD+KGIMDL KFLSP++VILVHGEKPKMV L E+IQ+EL I C  PAN   
Sbjct: 384 IHQLSFSPHTDSKGIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDA 443

Query: 598 VCISSTTHDHIHARASDAFLESCL 527
           V I ST   ++ A AS+ F+ SCL
Sbjct: 444 VHIPSTI--YVKAHASNTFIRSCL 465


>gb|AFK42005.1| unknown [Medicago truncatula]
          Length = 534

 Score =  204 bits (519), Expect = 3e-50
 Identities = 99/144 (68%), Positives = 119/144 (82%)
 Frame = -1

Query: 958 GMISGGFSLEVFRQWAPYEENLVTLPGYCVAGTVGHRLLSAKIPTQITLEENVQIDVRCQ 779
           GM+ GGFSLEVF+ WAP E+NLV LPGYC+AGTVGHRL S K PT++  + + QIDVRCQ
Sbjct: 325 GMLIGGFSLEVFKHWAPSEKNLVALPGYCMAGTVGHRLTSGK-PTKVDTDPDTQIDVRCQ 383

Query: 778 IHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKMVKLAEKIQSELAIQCSYPANNQT 599
           IHQL+FS HTD+KGIMDLVKFLSPKHV+LVHG+KPKMV L E+I SEL I CS+PANN+ 
Sbjct: 384 IHQLAFSAHTDSKGIMDLVKFLSPKHVMLVHGDKPKMVSLKERIDSELGIPCSHPANNEI 443

Query: 598 VCISSTTHDHIHARASDAFLESCL 527
           V ISST   +++A ASD F ++CL
Sbjct: 444 VTISST--QYVNAEASDTFTKNCL 465


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