BLASTX nr result

ID: Scutellaria24_contig00024392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024392
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   100   9e-20
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...    89   5e-16
ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thali...    80   2e-13
ref|XP_002882584.1| binding protein [Arabidopsis lyrata subsp. l...    78   8e-13

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  100 bits (250), Expect = 9e-20
 Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 13/158 (8%)
 Frame = +3

Query: 3   EICSIPPQIFSYAVTMLGRLSHGLVDVMDQDTLLAYLSHCSRLAF-DHGSKIFEGEMLDL 179
           ++CSIP +IFSYAVT+LGR+SH L DVM+Q+TLLAYLSHCS+    D+    F     D+
Sbjct: 512 KVCSIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSKSTIVDNSESFFPMIEGDI 571

Query: 180 PLKNNCVHLCAKSDVA-------PSFPELIEFKKATTLCLS-----HVEAPKCITIVFQK 323
           P   +C+ + + + ++           + +E +K+ T  L      H E  K I ++  K
Sbjct: 572 P-NCSCIDMISPAGMSLQQGASENENQKRLEPRKSATPLLDCQLEVHSEVAKSIKLILLK 630

Query: 324 VVNLWPLIQLGCINEVVPTLRSWKEELRIFSHDLHQSA 437
           + ++W L+Q GC+ EV+  LRS++EEL  +  D   SA
Sbjct: 631 INDIWFLVQKGCMAEVLRMLRSFREELATYMSDSLVSA 668


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  100 bits (250), Expect = 9e-20
 Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 13/158 (8%)
 Frame = +3

Query: 3   EICSIPPQIFSYAVTMLGRLSHGLVDVMDQDTLLAYLSHCSRLAF-DHGSKIFEGEMLDL 179
           ++CSIP +IFSYAVT+LGR+SH L DVM+Q+TLLAYLSHCS+    D+    F     D+
Sbjct: 512 KVCSIPSRIFSYAVTLLGRISHALKDVMNQNTLLAYLSHCSKSTIVDNSESFFPMIEGDI 571

Query: 180 PLKNNCVHLCAKSDVA-------PSFPELIEFKKATTLCLS-----HVEAPKCITIVFQK 323
           P   +C+ + + + ++           + +E +K+ T  L      H E  K I ++  K
Sbjct: 572 P-NCSCIDMISPAGMSLQQGASENENQKRLEPRKSATPLLDCQLEVHSEVAKSIKLILLK 630

Query: 324 VVNLWPLIQLGCINEVVPTLRSWKEELRIFSHDLHQSA 437
           + ++W L+Q GC+ EV+  LRS++EEL  +  D   SA
Sbjct: 631 INDIWFLVQKGCMAEVLRMLRSFREELATYMSDSLVSA 668


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 51/135 (37%), Positives = 73/135 (54%)
 Frame = +3

Query: 12  SIPPQIFSYAVTMLGRLSHGLVDVMDQDTLLAYLSHCSRLAFDHGSKIFEGEMLDLPLKN 191
           SIPP+ FSYAVT+LGR+S  L D++DQ TLLAY+S CSR     G ++ EGE   LP+  
Sbjct: 486 SIPPRYFSYAVTLLGRISFALRDILDQSTLLAYISRCSRAPISSGMEV-EGEESSLPVGT 544

Query: 192 NCVHLCAKSDVAPSFPELIEFKKATTLCLSHVEAPKCITIVFQKVVNLWPLIQLGCINEV 371
           + +    K                      H +  K + ++F KV ++W L+   CI+  
Sbjct: 545 SNIECQLK---------------------EHDQFRKFMDLIFAKVKDVWVLVHSSCISAA 583

Query: 372 VPTLRSWKEELRIFS 416
           + TLR+ KEEL + S
Sbjct: 584 LKTLRACKEELTMLS 598


>ref|NP_187492.2| integrator complex subunit 4 [Arabidopsis thaliana]
           gi|17473697|gb|AAL38305.1| unknown protein [Arabidopsis
           thaliana] gi|332641160|gb|AEE74681.1| integrator complex
           subunit 4 [Arabidopsis thaliana]
          Length = 936

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
 Frame = +3

Query: 6   ICSIPPQIFSYAVTMLGRLSHGLVDVMDQDTLLAYLSHCSRLAFDHGSKIFEGEMLDLPL 185
           I SIPP  FSY++ MLG+ S GL D+MDQD LLAYL+HC+ L+   G++  +G++     
Sbjct: 502 ITSIPPLAFSYSLAMLGKFSSGLHDMMDQDMLLAYLTHCAILSSSSGTEFNKGDVFFHAY 561

Query: 186 KNNCVHLCAKSDVAPSFPELIEFKKATTLCLSHVE----APKCITIVFQKVVNLWPLIQL 353
           +++   L     + P   + I  +     C + +E    A K +  +  K+   W L Q 
Sbjct: 562 RDSNADLAGNPVLLPG--KDIPAESKYMACKAELEIGNQALKFVNHILLKIKAAWLLSQS 619

Query: 354 GCINEVVPTLRSWKEELRIFSHD 422
           GC  E +  LR+ K+EL   + D
Sbjct: 620 GCSKEALRALRACKQELATLTAD 642


>ref|XP_002882584.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328424|gb|EFH58843.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 932

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
 Frame = +3

Query: 6   ICSIPPQIFSYAVTMLGRLSHGLVDVMDQDTLLAYLSHCSRLAFDHGSKIFEGEMLDLPL 185
           I SIPP  FSY++ MLG+ S GL D+MDQ  LLAYL+HC+ L+   G++  +G++     
Sbjct: 498 ITSIPPLAFSYSLAMLGKFSSGLHDMMDQYMLLAYLTHCAILSSSSGTEFNKGDIFFQAY 557

Query: 186 KNNCVHLCAKSDVAPSFPELIEFKKATTLCLSHV--EAPKCITIVFQKVVNLWPLIQLGC 359
           +++   L     + PS     E K   +     +  +A K +  +  K+   W L Q GC
Sbjct: 558 RDSNADLSGNPVLLPSKDIPAESKYMASKAELEIGNQALKFLNHILLKIKAAWLLSQSGC 617

Query: 360 INEVVPTLRSWKEELRIFSHD 422
             E +  LR+ K+EL   + D
Sbjct: 618 SKEALRALRACKQELATLTAD 638


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