BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024365
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       129   2e-28
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       129   3e-28
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      128   4e-28
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   127   9e-28
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   125   3e-27

>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/108 (58%), Positives = 80/108 (74%), Gaps = 2/108 (1%)
 Frame = +2

Query: 8   RTAKLLLIQLFGGPRVYKKLGDSIYSYFRQTQDDQWVRTTDFTPSCIGQSSGLCLQLPHG 187
           + A+ LL+QLFG PR+YK+L DS YS+F++T DDQWVRTTDFTPS IG SS LCL+  +G
Sbjct: 161 QNAQFLLLQLFGAPRIYKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNG 220

Query: 188 MRLPNFRDNFAYYTESEDTLVLQNG--VPFSEDLPLVPIVKPPRGHEL 325
           ++LPNF ++F YY ES +  +LQ G    FS+ L LVPIV  P G EL
Sbjct: 221 VQLPNFSESFFYYKESMNQFILQTGFTFSFSQKLALVPIVHLPEGIEL 268


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/106 (58%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
 Frame = +2

Query: 14  AKLLLIQLFGGPRVYKKLGDSIYSYFRQTQDDQWVRTTDFTPSCIGQSSGLCLQLPHGMR 193
           A+ LL+QLFG PR+YK+L +S YS+F++T DDQWVRTTDFTPS IG SS LCL+  +G+R
Sbjct: 163 AQFLLLQLFGAPRIYKRLEESCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGIR 222

Query: 194 LPNFRDNFAYYTESEDTLVLQNG--VPFSEDLPLVPIVKPPRGHEL 325
           LPNFR++F YY ES + ++L+ G    FS+ L LVPIV  P G +L
Sbjct: 223 LPNFRESFFYYKESGNQVILRTGFTFSFSQKLALVPIVHLPNGVDL 268


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/112 (58%), Positives = 82/112 (73%), Gaps = 9/112 (8%)
 Frame = +2

Query: 5   SRTAKLLLIQLFGGPRVYKK--------LGDSIYSYFRQTQDDQWVRTTDFTPS-CIGQS 157
           S+T+K LLIQLFG PR+Y+K          D + +YF+   DDQWVRTTDFT S CIGQS
Sbjct: 162 SQTSKHLLIQLFGAPRIYEKEVPASECVFDDPLLNYFKDMPDDQWVRTTDFTRSNCIGQS 221

Query: 158 SGLCLQLPHGMRLPNFRDNFAYYTESEDTLVLQNGVPFSEDLPLVPIVKPPR 313
           S LCL+LPH ++LPNFR+NFAYY E+E  LVL++G  +S +L LVPIV P R
Sbjct: 222 SVLCLELPHNLQLPNFRENFAYYKENEGRLVLESGSSYSCNLSLVPIVCPSR 273


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
           gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
           [Nicotiana glutinosa]
          Length = 1117

 Score =  127 bits (319), Expect = 9e-28
 Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 3/107 (2%)
 Frame = +2

Query: 14  AKLLLIQLFGGPRVYKKLGDSIYSYFRQTQDDQWVRTTDFTPSCIGQSSGLCLQLPHGMR 193
           A+ LL+QL G PR+YK+L DS YS+F++T DDQWVRTTDFTPS IG SS LCL+  +G+R
Sbjct: 163 AQFLLLQLSGAPRIYKRLEDSCYSFFKETPDDQWVRTTDFTPSWIGLSSSLCLEFHNGVR 222

Query: 194 LPNFRDNFAYYTESEDTLVLQNGVPFS---EDLPLVPIVKPPRGHEL 325
           LPNF ++F YY ES + ++LQ G  FS   + L LVPIV  P G EL
Sbjct: 223 LPNFSESFFYYKESANQVILQTGFTFSFSQKKLALVPIVHLPEGIEL 269


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/105 (57%), Positives = 77/105 (73%), Gaps = 2/105 (1%)
 Frame = +2

Query: 8   RTAKLLLIQLFGGPRVYKKLGDSIYSYFRQTQDDQWVRTTDFTPSCIGQSSGLCLQLPHG 187
           + A+ LLIQLFG PR+YK+L +S YS+F++T DDQWVRTTDF PS IG SS LCLQ   G
Sbjct: 161 QNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRRG 220

Query: 188 MRLPNFRDNFAYYTESEDTLVLQNGVPF--SEDLPLVPIVKPPRG 316
           + LPNF+++F +YTE E+ + LQ G  F  S+   LVP V+PP G
Sbjct: 221 VHLPNFQESFFHYTERENNITLQTGFTFFVSQKSALVPNVQPPEG 265