BLASTX nr result

ID: Scutellaria24_contig00024318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024318
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   202   6e-50
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   202   6e-50
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   202   6e-50
ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vit...   201   1e-49
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   200   2e-49

>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  202 bits (514), Expect = 6e-50
 Identities = 95/123 (77%), Positives = 104/123 (84%)
 Frame = +1

Query: 1   HTFAAGDRRHELSVEIYRKLEELGGDMEKAGYVADTTNVFREVGDVEKSESVRYHSERLA 180
           HTF AGDR H   VEIY KLEEL  +MEKAGYVADT+ V R V   EK+E++RYHSERLA
Sbjct: 476 HTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLA 535

Query: 181 IAFALITFPPERPIRVMKNLRVCGDCHVAIKYMSKCSGRVITVRDNNRFHRFENGECSCG 360
           IAF LITFPP RPIRVMKNLRVCGDCH AIK+MSKC GRV+ VRDNNRFHRFE+G+CSCG
Sbjct: 536 IAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCG 595

Query: 361 DYW 369
           DYW
Sbjct: 596 DYW 598


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  202 bits (514), Expect = 6e-50
 Identities = 95/123 (77%), Positives = 104/123 (84%)
 Frame = +1

Query: 1   HTFAAGDRRHELSVEIYRKLEELGGDMEKAGYVADTTNVFREVGDVEKSESVRYHSERLA 180
           HTF AGDR H   VEIY KLEEL  +MEKAGYVADT+ V R V   EK+E++RYHSERLA
Sbjct: 476 HTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEEKNETIRYHSERLA 535

Query: 181 IAFALITFPPERPIRVMKNLRVCGDCHVAIKYMSKCSGRVITVRDNNRFHRFENGECSCG 360
           IAF LITFPP RPIRVMKNLRVCGDCH AIK+MSKC GRV+ VRDNNRFHRFE+G+CSCG
Sbjct: 536 IAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNNRFHRFEDGKCSCG 595

Query: 361 DYW 369
           DYW
Sbjct: 596 DYW 598


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  202 bits (514), Expect = 6e-50
 Identities = 94/123 (76%), Positives = 107/123 (86%)
 Frame = +1

Query: 1   HTFAAGDRRHELSVEIYRKLEELGGDMEKAGYVADTTNVFREVGDVEKSESVRYHSERLA 180
           HTFAAGDR H  + EIY KLEELG +M KAGYVADT+ V +EV   EKS+++RYHSERLA
Sbjct: 460 HTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVLKEVDGDEKSQTIRYHSERLA 519

Query: 181 IAFALITFPPERPIRVMKNLRVCGDCHVAIKYMSKCSGRVITVRDNNRFHRFENGECSCG 360
           IAF LITFPPE PIRVMKNLRVCGDCH AIK++SKC+GRVI VRDNNRFHRFE+G+C+CG
Sbjct: 520 IAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCG 579

Query: 361 DYW 369
           DYW
Sbjct: 580 DYW 582


>ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  201 bits (511), Expect = 1e-49
 Identities = 91/123 (73%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   HTFAAGDRRHELSVEIYRKLEELGGDMEKAGYVADTTNVFREVGDVEKSESVRYHSERLA 180
           HTFAAGDR H  + +IY+KLEELG +ME+AGY+ADT+ V +EV   EK++++RYHSERLA
Sbjct: 349 HTFAAGDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLA 408

Query: 181 IAFALITFPPERPIRVMKNLRVCGDCHVAIKYMSKCSGRVITVRDNNRFHRFENGECSCG 360
           IAF LI+FPPERPIRVMKNLRVCGDCH AIK+MSKC GR I VRDNNRFHRFE+G CSC 
Sbjct: 409 IAFGLISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCR 468

Query: 361 DYW 369
           DYW
Sbjct: 469 DYW 471


>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  200 bits (509), Expect = 2e-49
 Identities = 93/123 (75%), Positives = 106/123 (86%)
 Frame = +1

Query: 1   HTFAAGDRRHELSVEIYRKLEELGGDMEKAGYVADTTNVFREVGDVEKSESVRYHSERLA 180
           HTFAAGDR H  SVEIY KL+ELG +M+KAGYVADT+ V +EV   EKS S+RYHSERLA
Sbjct: 474 HTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLA 533

Query: 181 IAFALITFPPERPIRVMKNLRVCGDCHVAIKYMSKCSGRVITVRDNNRFHRFENGECSCG 360
           IAF  ITFP  +PIRVMKNLRVCGDCH AIK++SKC+GRVI VRDNNRFHRFE+G+C+CG
Sbjct: 534 IAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCG 593

Query: 361 DYW 369
           DYW
Sbjct: 594 DYW 596


Top