BLASTX nr result

ID: Scutellaria24_contig00024195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024195
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623038.1| WD repeat-containing protein [Medicago trunc...    65   1e-08
ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...    64   3e-08
emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]    64   3e-08
ref|XP_003530889.1| PREDICTED: uncharacterized protein LOC100793...    63   5e-08
ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communi...    63   5e-08

>ref|XP_003623038.1| WD repeat-containing protein [Medicago truncatula]
           gi|358345001|ref|XP_003636573.1| WD repeat-containing
           protein [Medicago truncatula]
           gi|355498053|gb|AES79256.1| WD repeat-containing protein
           [Medicago truncatula] gi|355502508|gb|AES83711.1| WD
           repeat-containing protein [Medicago truncatula]
          Length = 1049

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
 Frame = -2

Query: 502 RRTLTMDWDGLGXXXXXXXXXXXXXRASSAGPLDLVXXXXXXXXXXXXXXXFASTXXXXX 323
           R+TLTM+WDGLG             R S+A P DL                FAS      
Sbjct: 4   RKTLTMNWDGLGDDEDDLHFFETYNRLSTAVPDDLASSSDEDDDYEDSRLSFASAVSSFH 63

Query: 322 XXXXXXXXXXXA------YDMWMGEPGDIRERRKRLLQGMGLSSSKDMLRLASAKIARAV 161
                      A      YD+WM  PG I ERR+RLL  MGL  +K+ L+  S  I+RA+
Sbjct: 64  PSKHRKPELPPATGIAPNYDIWMAAPGSITERRRRLLGSMGLDENKENLKATSIVISRAI 123

Query: 160 SSRLHHKDHDSSTN 119
           + +  +K+++  T+
Sbjct: 124 TKKFENKNNNQETH 137


>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -2

Query: 286 YDMWMGEPGDIRERRKRLLQGMGLSSSKDMLRLASAKIARAVSSRL 149
           Y MWM EPG I+ERRKRLLQGMGL+S K+ +RLAS    RA S+++
Sbjct: 92  YGMWMAEPGSIQERRKRLLQGMGLTSEKEFIRLASVGFKRAASTKV 137


>emb|CAN65559.1| hypothetical protein VITISV_034983 [Vitis vinifera]
          Length = 1068

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -2

Query: 286 YDMWMGEPGDIRERRKRLLQGMGLSSSKDMLRLASAKIARAVSSRL 149
           Y MWM EPG I+ERRKRLLQGMGL+S K+ +RLAS    RA S+++
Sbjct: 96  YGMWMAEPGSIQERRKRLLQGMGLTSEKEFIRLASVGFKRAASTKV 141


>ref|XP_003530889.1| PREDICTED: uncharacterized protein LOC100793299 [Glycine max]
          Length = 905

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
 Frame = -2

Query: 502 RRTLTMDWDGLGXXXXXXXXXXXXXRASSAGPLDLVXXXXXXXXXXXXXXXFASTXXXXX 323
           R+T+TM+WDGLG               S+A P DL                  S+     
Sbjct: 4   RKTMTMNWDGLGDDDDDDHFFETYNLLSAAVPQDLADDDNDFEDSRLSFASTISSTLSIK 63

Query: 322 XXXXXXXXXXXA---YDMWMGEPGDIRERRKRLLQGMGLSSSKDMLRLASAKIARAVSSR 152
                          Y++WM  PG I ERR+RLL  MGL  +K++L+  SA IARA++ +
Sbjct: 64  PRTSHFSANFTGKPNYEIWMAAPGSISERRRRLLGSMGLDENKELLQATSAAIARAITKK 123

Query: 151 LHHK----DHDSSTNS 116
             +     ++D++ N+
Sbjct: 124 FENNNGIINNDNNNNN 139


>ref|XP_002527721.1| WD-repeat protein, putative [Ricinus communis]
           gi|223532862|gb|EEF34634.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 939

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 42/124 (33%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
 Frame = -2

Query: 502 RRTLTMDWDGLGXXXXXXXXXXXXXR--ASSAGPLDLVXXXXXXXXXXXXXXXF------ 347
           ++T TM+WD LG                 SSA PLDL                       
Sbjct: 4   KKTFTMNWDALGDHDVDDDDRFFETCDRLSSAVPLDLASSGSDDDDEFDDPRSSFASAIS 63

Query: 346 --ASTXXXXXXXXXXXXXXXXAYDMWMGEPGDIRERRKRLLQGMGLSSSKDMLRLASAKI 173
             ++T                 YD+WM  PG I ERRKRLLQGMGLS+ K++LR+AS ++
Sbjct: 64  SVSTTEFRNYASVAAAAAISPDYDVWMAAPGSINERRKRLLQGMGLSADKELLRIASNEL 123

Query: 172 ARAV 161
            R V
Sbjct: 124 TRGV 127


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