BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024162
         (1336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   325   2e-86
emb|CBI36057.3| unnamed protein product [Vitis vinifera]              313   8e-83
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   308   2e-81
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   307   5e-81
ref|XP_003616940.1| MMS19 nucleotide excision repair protein-lik...   301   3e-79

>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  325 bits (832), Expect = 2e-86
 Identities = 180/343 (52%), Positives = 231/343 (67%), Gaps = 8/343 (2%)
 Frame = -3

Query: 1331 ALGSLVNKLPLETKGMDSSRSLCLNEALDMIFS-NLI------GSSCFDXXXXXXXXXXX 1173
            ALGSLVNKL  ++     S    + EA+D+IFS NL+       S  FD           
Sbjct: 833  ALGSLVNKLDQKSNDACISGDCTIEEAMDIIFSINLLCSFGNGSSGRFDRTRNGDEMDLI 892

Query: 1172 XXSLRLDTLRMQSETKKIVGLAWIGKGLLMRGHEKVKDITMALLSFLALDHVAGDLKELQ 993
               L    L    +   IVGLAWIGKGLLMRGHEKVKDITM  L+ L  D   G      
Sbjct: 893  KLCLDAPNLAW-IKIPAIVGLAWIGKGLLMRGHEKVKDITMVFLNCLLSDGEIGASPLKH 951

Query: 992  NLIEGLDKEDVHQLRM-SAADAFQIIMSDSGECLNRMYHATIRPLYKQRLFSTILPIFXX 816
              +E   ++D+ Q  M SA+DAFQI+MSDS  CLNR YHA +RPLYKQR FS+I+PI   
Sbjct: 952  GSLENNGEQDMQQSVMKSASDAFQILMSDSELCLNRKYHAIVRPLYKQRFFSSIMPILYP 1011

Query: 815  XXXXXXXXXVRYMLYRAFAHIVSDTPMTAILGEAKKLVPILLDCLSILSKDAVNKEIIFN 636
                      + +LYRAFAH++SDTP++ I  +AKKLVP+LLD L++L KD ++K+I++ 
Sbjct: 1012 LITKSDSSFSKSLLYRAFAHVISDTPLSVISNDAKKLVPVLLDGLTLLGKDVLDKDIMYG 1071

Query: 635  ILLVISGVLLEENGRQSAVENAPSIVDQLIELTAYSHMMAIRETALQCLVAVSQLPHTRV 456
            +LLV+SG+L + NG+++ +ENA  I+  LIEL AY HMM IRETA+QCLVA+S+LPHTR+
Sbjct: 1072 LLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMMLIRETAVQCLVAMSELPHTRI 1131

Query: 455  YPLRAKVLRATSKTLDDPKRIVRREAVKCRQAWASSASRSLQF 327
            YP+R +VL+A SK LDDPKR VR+EAV+CRQAWAS ASRSL +
Sbjct: 1132 YPVRIQVLQAISKALDDPKRAVRQEAVRCRQAWASIASRSLHY 1174


>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  313 bits (801), Expect = 8e-83
 Identities = 169/341 (49%), Positives = 228/341 (66%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1331 ALGSLVNKLPLETKGMDSSRSLCLNEALDMIFSNLIGSSCFDXXXXXXXXXXXXXSLRLD 1152
            ALGS+VNKL  ++ G++ S +  L +ALD+IF+  +  S                 + L 
Sbjct: 819  ALGSMVNKLCPKSNGVEISSTCTLEDALDIIFNTSLWDSHNHGPLKRCSGIGVDNEMGLA 878

Query: 1151 TLRMQSETKKIV------GLAWIGKGLLMRGHEKVKDITMALLSFLALDHVAGDLKELQN 990
             L + +   +++      GLAWIGKGLL+RGHEKVKDITM  L  L   +      + Q+
Sbjct: 879  NLCLSASNCQLLQVCAIEGLAWIGKGLLLRGHEKVKDITMIFLRCLLSKN-----NQEQD 933

Query: 989  LIEGLDKEDVHQLRMSAADAFQIIMSDSGECLNRMYHATIRPLYKQRLFSTILPIFXXXX 810
            ++  + K        SAADAF ++MSDS  CLN+ +HA IRPLYKQR FS++LPI     
Sbjct: 934  VLPSVAK--------SAADAFHVLMSDSEICLNKRFHANIRPLYKQRFFSSVLPILVSSM 985

Query: 809  XXXXXXXVRYMLYRAFAHIVSDTPMTAILGEAKKLVPILLDCLSILSKDAVNKEIIFNIL 630
                    R MLYRA AHI+SDTP+ A+L EAKK++PILLD LSILS   ++K+I++N+L
Sbjct: 986  AESRLSNTRSMLYRALAHIISDTPLIAVLSEAKKIIPILLDSLSILSTYNLDKDILYNLL 1045

Query: 629  LVISGVLLEENGRQSAVENAPSIVDQLIELTAYSHMMAIRETALQCLVAVSQLPHTRVYP 450
            LV+SG+L+++NG+++ VENA  I++ LI L  Y HMM +RETA+QCLVA+S+LPH R+YP
Sbjct: 1046 LVLSGILMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETAIQCLVAMSRLPHARIYP 1105

Query: 449  LRAKVLRATSKTLDDPKRIVRREAVKCRQAWASSASRSLQF 327
            +R +VLR+  K LDDPKR VR EAV+CRQAWAS ASRSL F
Sbjct: 1106 MRTQVLRSVQKALDDPKRAVRHEAVRCRQAWASIASRSLHF 1146


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  308 bits (790), Expect = 2e-81
 Identities = 166/341 (48%), Positives = 228/341 (66%), Gaps = 6/341 (1%)
 Frame = -3

Query: 1331 ALGSLVNKLPLETKGMDSSRSLCLNEALDMIFSNLIGSSCFDXXXXXXXXXXXXXSLRLD 1152
            ALGS++NKL +++  ++ S  + L EA+D+IF       C                L   
Sbjct: 813  ALGSMINKLSVKSDKVEVSSYVSLEEAIDIIFKTEF--RCLHNESTGDGSEMFLTDL-CS 869

Query: 1151 TLRMQS--ETKKIVGLAWIGKGLLMRGHEKVKDITMALLSFLALDHVAGDLKELQNLIEG 978
            ++   S  +   +VGL+WIGKGLL+ GH+KV+DITM  L  L +     D   LQ     
Sbjct: 870  SIEKSSLLQVHAVVGLSWIGKGLLLCGHDKVRDITMVFLQLL-VSKSRTDASPLQQF--K 926

Query: 977  LDKEDVHQLRMS----AADAFQIIMSDSGECLNRMYHATIRPLYKQRLFSTILPIFXXXX 810
            L+K++   L  +    AA+AF I+MSDS  CLNR +HA +RPLYKQR FST++PIF    
Sbjct: 927  LEKDNETSLDFAVMKGAAEAFHILMSDSEACLNRKFHAIVRPLYKQRFFSTMMPIFQTLV 986

Query: 809  XXXXXXXVRYMLYRAFAHIVSDTPMTAILGEAKKLVPILLDCLSILSKDAVNKEIIFNIL 630
                    RYMLY+A+AH++SDTP+TAIL +AKK +P+LLD L  LS + +NK++++++L
Sbjct: 987  SKSDTSLSRYMLYQAYAHVISDTPLTAILSDAKKFIPMLLDGLLTLSVNGINKDVVYSLL 1046

Query: 629  LVISGVLLEENGRQSAVENAPSIVDQLIELTAYSHMMAIRETALQCLVAVSQLPHTRVYP 450
            LV+SG+L+++NG+++  ENA  IVD L  LT +SHMM +RETA+QCLVAVS+LPH R+YP
Sbjct: 1047 LVLSGILMDKNGQEAVTENAHKIVDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYP 1106

Query: 449  LRAKVLRATSKTLDDPKRIVRREAVKCRQAWASSASRSLQF 327
            +R +VL   SK LDDPKR VR+EAV+CRQAWAS ASRSL F
Sbjct: 1107 MRRQVLHVISKALDDPKRSVRQEAVRCRQAWASIASRSLHF 1147


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  307 bits (786), Expect = 5e-81
 Identities = 163/342 (47%), Positives = 227/342 (66%), Gaps = 7/342 (2%)
 Frame = -3

Query: 1331 ALGSLVNKLPLETKGMDSSRSLCLNEALDMIFSNLIGSSCFDXXXXXXXXXXXXXSLRLD 1152
            ALGS++NKL  ++ G + S  L L EALD+IF+  I  S  +              +  D
Sbjct: 799  ALGSMLNKLTSKSNGAEKSDELTLEEALDIIFNTKIWFSSNNMLQIYNGSSNGSDIVLTD 858

Query: 1151 -----TLRMQSETKKIVGLAWIGKGLLMRGHEKVKDITMALLSFLALDHVAGDLKELQNL 987
                 T     ++  I GL+WIGKGLL+RGHEK+KDITM     L  D     +  ++  
Sbjct: 859  LCLGITNDRLLQSNAICGLSWIGKGLLLRGHEKIKDITMIFTECLISDRRKTSVPLVEGS 918

Query: 986  IEGLDKEDVHQL-RMSAADAFQIIMSDSGECLNRMYHATIRPLYKQRLFSTILPIFXXXX 810
            +E  +K+    L R  A +AF ++MSD+ +CLNR +HAT+RPLYKQR FS+++PIF    
Sbjct: 919  LENTEKQKCDPLARKCATEAFHVLMSDAEDCLNRKFHATVRPLYKQRFFSSMMPIFLQLI 978

Query: 809  XXXXXXXVRYMLYRAFAHIVSDTPMTAILGEAKKLVPILLDCLSILSKDAVNKEIIFNIL 630
                    R +L RAFAH++SDTP+  IL EAKKL+P+LLDCL +L++D  +K+I++ +L
Sbjct: 979  SRSDSLLSRSLLLRAFAHVMSDTPLIVILNEAKKLIPVLLDCLFMLTEDIQDKDILYGLL 1038

Query: 629  LVISGVLLEENGRQSAVENAPSIVDQLIELTAYSHMMAIRETALQCLVAVSQLPHTRVYP 450
            LV+SG+L E+NG+++ +ENA  I++ LI+L  Y H   +RETA+QCLVA+S+LPH R+YP
Sbjct: 1039 LVLSGMLTEKNGQEAVIENAHIIINGLIKLVDYPHKTLVRETAIQCLVALSELPHVRIYP 1098

Query: 449  LRAKVLRATSKTLDDPKRIVRREAVKCRQAWAS-SASRSLQF 327
            LR +VL+A  K LDD KR VR EAVKCRQAWAS ++SRSL+F
Sbjct: 1099 LRTQVLQAIFKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF 1140


>ref|XP_003616940.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355518275|gb|AES99898.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1139

 Score =  301 bits (771), Expect = 3e-79
 Identities = 167/346 (48%), Positives = 229/346 (66%), Gaps = 11/346 (3%)
 Frame = -3

Query: 1331 ALGSLVNKLPLETKGMDSSRSLCLNEALDMIFSNLIGSSCFDXXXXXXXXXXXXXSLRLD 1152
            ALGS+VNKL  ++ G + S  L L EAL +IF+  I  S  +              +  D
Sbjct: 799  ALGSMVNKLISKSNGAEKSDELTLEEALHIIFNTKICFSSDNMLQICDGSINRNEIVLTD 858

Query: 1151 T-LRMQSE----TKKIVGLAWIGKGLLMRGHEKVKDITMALLSFLALDHVAGDLKELQNL 987
              L M ++    T  + GL+WIGKGLL+RGHEK+KDIT  L   L  D  +        L
Sbjct: 859  VCLGMTNDRLLQTNAVCGLSWIGKGLLLRGHEKIKDITKILTECLISDRNSS-----LPL 913

Query: 986  IEGLDKEDV-----HQLRMSAADAFQIIMSDSGECLNRMYHATIRPLYKQRLFSTILPIF 822
            IEGLD+ +      H  R  AADAF ++MSD+ +CLNR +HAT+RPLYKQR FS+++PIF
Sbjct: 914  IEGLDENNEEHKGDHLARKCAADAFHVLMSDAEDCLNRKFHATMRPLYKQRFFSSMMPIF 973

Query: 821  XXXXXXXXXXXVRYMLYRAFAHIVSDTPMTAILGEAKKLVPILLDCLSILSKDAVNKEII 642
                        RY+L RAFA ++S TP+  IL +AK+L+ +LLDCLS+L++D  +K+I+
Sbjct: 974  LQLISRSDSSSSRYLLLRAFARVMSVTPLIVILNDAKELISVLLDCLSMLTEDIQDKDIL 1033

Query: 641  FNILLVISGVLLEENGRQSAVENAPSIVDQLIELTAYSHMMAIRETALQCLVAVSQLPHT 462
            + +LLV+SG+L E+NG+++ +ENA  I++ LI+L  YSH   +RE+ +QCLVA+S+LPH 
Sbjct: 1034 YGLLLVLSGMLTEKNGQEAVIENAHIIINCLIKLVDYSHKTLVRESCIQCLVALSKLPHV 1093

Query: 461  RVYPLRAKVLRATSKTLDDPKRIVRREAVKCRQAWAS-SASRSLQF 327
            R+YPLR +VL A SK LDD KR VR EAVKCRQAWAS ++SRSL+F
Sbjct: 1094 RIYPLRTQVLEAISKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF 1139