BLASTX nr result

ID: Scutellaria24_contig00024117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024117
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat...   184   6e-45
ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,...   168   4e-40
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   167   6e-40
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat...   166   1e-39

>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
           unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/113 (79%), Positives = 100/113 (88%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +R MIDGFCKTGNI+SG SFLL  I KG IPSLTTFGRVLNCLC+K R+ EA+ II+LMV
Sbjct: 639 YRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMV 698

Query: 160 NKGIVPEEVNTIFEADKKEVAAPKIVVENLWKKSHITYYAYELLHDAVRDKKL 2
           +KGIVPE VNTIFEADKKEVAAPKIVVENL KK HITY+AYE+LHD +RDKKL
Sbjct: 699 HKGIVPEVVNTIFEADKKEVAAPKIVVENLMKKGHITYFAYEILHDGIRDKKL 751



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +  +I+G CK G +    + ++D I KG +P + TF  +++  C K +L  AIEI+  M 
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487

Query: 160 NKGIVPEEV------NTIFEADKKE--VAAPKIVVENLWKKSHITY 47
           N G+ P+ +      N + +A K E  +   K+++E     + ITY
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITY 533


>ref|XP_002316516.1| predicted protein [Populus trichocarpa] gi|222865556|gb|EEF02687.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/112 (73%), Positives = 96/112 (85%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +R MIDGFC TGN DSG  FLL+ I KGFIPSLTTFGRV+NCLCV+HR+ EA++II+ MV
Sbjct: 640 YRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMV 699

Query: 160 NKGIVPEEVNTIFEADKKEVAAPKIVVENLWKKSHITYYAYELLHDAVRDKK 5
           + GIVPE VN+I EADKK VAAPKIVVE+L K+S ITYYAYELL+D +RDKK
Sbjct: 700 HNGIVPEVVNSISEADKKVVAAPKIVVEDLLKRSCITYYAYELLYDGIRDKK 751


>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 735

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/113 (69%), Positives = 96/113 (84%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +R MIDGFCK GN++SG  FLL  I  GF+PSLTTFGRV+NCLCV+HR+ EA+ I++LMV
Sbjct: 612 YRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMV 671

Query: 160 NKGIVPEEVNTIFEADKKEVAAPKIVVENLWKKSHITYYAYELLHDAVRDKKL 2
             G+VPE V TIF+ADKK VAAPKI+VE+L KKSHITYYAYELL+D +R+KKL
Sbjct: 672 RTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSHITYYAYELLYDGIRNKKL 724


>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  167 bits (424), Expect = 6e-40
 Identities = 81/113 (71%), Positives = 95/113 (84%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +R MID +CKTGNID   +FLL+ I+KG +PS TT G+VLNCLCV HRL EA+ II LMV
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 160 NKGIVPEEVNTIFEADKKEVAAPKIVVENLWKKSHITYYAYELLHDAVRDKKL 2
             GIVPEEVN+IFEADKKEVAAPKIVVE L KKSHITYY+YELL+D +R++KL
Sbjct: 700 QNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGIRNRKL 752


>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  166 bits (421), Expect = 1e-39
 Identities = 80/113 (70%), Positives = 95/113 (84%)
 Frame = -3

Query: 340 FRCMIDGFCKTGNIDSGSSFLLDCITKGFIPSLTTFGRVLNCLCVKHRLREAIEIIYLMV 161
           +R MID +CKTGNID   +FLL+ I+KG +PS TT G+VLNCLCV HRL EA+ II LMV
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 160 NKGIVPEEVNTIFEADKKEVAAPKIVVENLWKKSHITYYAYELLHDAVRDKKL 2
             GIVPEEVN+IFEADKKEVAAPKIVVE L KKSHITYY+YELL+D +R++K+
Sbjct: 700 QNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGIRNRKV 752


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