BLASTX nr result

ID: Scutellaria24_contig00024100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024100
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK88256.1| beta-actin, partial [Lagenorhynchus acutus]            160   8e-38
gb|AAP73453.1| actin [Gossypium hirsutum]                             160   1e-37
gb|AAP73452.1| actin [Gossypium hirsutum]                             160   1e-37
ref|NP_595618.1| actin Act1 [Schizosaccharomyces pombe 972h-] gi...   160   1e-37
gb|ACL97684.1| actin 1 [Gossypium hirsutum]                           160   1e-37

>gb|ABK88256.1| beta-actin, partial [Lagenorhynchus acutus]
          Length = 364

 Score =  160 bits (406), Expect = 8e-38
 Identities = 72/80 (90%), Positives = 76/80 (95%)
 Frame = -2

Query: 242 GDDAPRAVFPSVVGVPKYRGVMVGMGHKDSYVGDEAQSKRGMLVLKYPIEHGIVNNWDDM 63
           GDDAPRAVFPS+VG P+Y+GVMVGMG KDSYVGDEAQSKRG+L LKYPIEHGIV NWDDM
Sbjct: 12  GDDAPRAVFPSIVGRPRYQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 71

Query: 62  EKIWHHTFYNELRVAPEEHP 3
           EKIWHHTFYNELRVAPEEHP
Sbjct: 72  EKIWHHTFYNELRVAPEEHP 91


>gb|AAP73453.1| actin [Gossypium hirsutum]
          Length = 377

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/80 (88%), Positives = 77/80 (96%)
 Frame = -2

Query: 242 GDDAPRAVFPSVVGVPKYRGVMVGMGHKDSYVGDEAQSKRGMLVLKYPIEHGIVNNWDDM 63
           GDDAPRAVFPS+VG P++ GVMVGMGHKD+YVGDEAQSKRG+L LKYPIEHGIV+NWDDM
Sbjct: 25  GDDAPRAVFPSIVGRPRHTGVMVGMGHKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84

Query: 62  EKIWHHTFYNELRVAPEEHP 3
           EKIWHHTFYNELRVAPEEHP
Sbjct: 85  EKIWHHTFYNELRVAPEEHP 104


>gb|AAP73452.1| actin [Gossypium hirsutum]
          Length = 377

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/80 (88%), Positives = 77/80 (96%)
 Frame = -2

Query: 242 GDDAPRAVFPSVVGVPKYRGVMVGMGHKDSYVGDEAQSKRGMLVLKYPIEHGIVNNWDDM 63
           GDDAPRAVFPS+VG P++ GVMVGMGHKD+YVGDEAQSKRG+L LKYPIEHGIV+NWDDM
Sbjct: 25  GDDAPRAVFPSIVGRPRHTGVMVGMGHKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84

Query: 62  EKIWHHTFYNELRVAPEEHP 3
           EKIWHHTFYNELRVAPEEHP
Sbjct: 85  EKIWHHTFYNELRVAPEEHP 104


>ref|NP_595618.1| actin Act1 [Schizosaccharomyces pombe 972h-]
           gi|113303|sp|P10989.1|ACT_SCHPO RecName: Full=Actin
           gi|4900|emb|CAA68501.1| unnamed protein product
           [Schizosaccharomyces pombe] gi|2257492|dbj|BAA21389.1|
           actin [Schizosaccharomyces pombe]
           gi|13872530|emb|CAC37502.1| actin Act1
           [Schizosaccharomyces pombe]
          Length = 375

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/80 (88%), Positives = 76/80 (95%)
 Frame = -2

Query: 242 GDDAPRAVFPSVVGVPKYRGVMVGMGHKDSYVGDEAQSKRGMLVLKYPIEHGIVNNWDDM 63
           GDDAPRAVFPS+VG P++ G+MVGMG KDSYVGDEAQSKRG+L LKYPIEHGIVNNWDDM
Sbjct: 23  GDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 82

Query: 62  EKIWHHTFYNELRVAPEEHP 3
           EKIWHHTFYNELRVAPEEHP
Sbjct: 83  EKIWHHTFYNELRVAPEEHP 102


>gb|ACL97684.1| actin 1 [Gossypium hirsutum]
          Length = 377

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/80 (88%), Positives = 77/80 (96%)
 Frame = -2

Query: 242 GDDAPRAVFPSVVGVPKYRGVMVGMGHKDSYVGDEAQSKRGMLVLKYPIEHGIVNNWDDM 63
           GDDAPRAVFPS+VG P++ GVMVGMGHKD+YVGDEAQSKRG+L LKYPIEHGIV+NWDDM
Sbjct: 25  GDDAPRAVFPSIVGRPRHTGVMVGMGHKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84

Query: 62  EKIWHHTFYNELRVAPEEHP 3
           EKIWHHTFYNELRVAPEEHP
Sbjct: 85  EKIWHHTFYNELRVAPEEHP 104


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