BLASTX nr result

ID: Scutellaria24_contig00024085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024085
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...    84   1e-14
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    80   2e-13
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...    78   9e-13
tpg|DAA45216.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea m...    77   2e-12

>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/85 (49%), Positives = 53/85 (62%)
 Frame = +1

Query: 43  IDVNDVNIDDCSKFVTDASLKDWKSEDLIASIRDRFVTGDWSKASLRNQLSXXXXXXXXX 222
           +D  ++N +DCSKF     LK+WK ED+  SIRDRFVTGDWSKA+ RNQ S         
Sbjct: 599 LDGTNINTEDCSKFTNYTDLKNWKEEDIYESIRDRFVTGDWSKAAKRNQPS----DANME 654

Query: 223 XXXXXXXEFEDLETGQKYESDHADD 297
                  +FEDLETG++YES   D+
Sbjct: 655 DDDDVYGDFEDLETGERYESCKKDE 679


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = +1

Query: 46  DVNDVNIDDCSKFVTDASLKDWKSEDLIASIRDRFVTGDWSKASLRNQLSXXXXXXXXXX 225
           DV +V+ D+CSKF   + LK+WK E++  SIRDRFVTGDWSKA+ RN+L           
Sbjct: 619 DVENVDADECSKFTNYSDLKNWKDEEIYESIRDRFVTGDWSKAAQRNKL---PTANDEDD 675

Query: 226 XXXXXXEFEDLETGQKYESDHADDI-NDSMKDDTLAVEERR 345
                 +FEDLETG+K+ +   ++  N SM+ +    E+R+
Sbjct: 676 EDSVYGDFEDLETGEKHGNHQKEESGNVSMQKEDELEEQRK 716


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
 Frame = +1

Query: 58  VNIDDCSKFVTDASLKDWKSEDLIASIRDRFVTGDWSKASLRNQLSXXXXXXXXXXXXXX 237
           VN +DCSKF   A+LK WK  +++ SIRDRF+TGDWSKA+ R Q+               
Sbjct: 603 VNAEDCSKFTNHANLKKWKEVEIVESIRDRFITGDWSKAASRGQV---LETGSDRDDDDV 659

Query: 238 XXEFEDLETGQKYESDHADDI-NDSM 312
             EFEDLETG++Y S  A D  ND++
Sbjct: 660 YGEFEDLETGEQYRSQEAGDAGNDAI 685


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
           gi|241921770|gb|EER94914.1| hypothetical protein
           SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 45/97 (46%), Positives = 58/97 (59%)
 Frame = +1

Query: 55  DVNIDDCSKFVTDASLKDWKSEDLIASIRDRFVTGDWSKASLRNQLSXXXXXXXXXXXXX 234
           D++ +DCSKF   A L+DW +EDLI SIRDRFVTG+WSKA+LR Q               
Sbjct: 620 DIDAEDCSKFFK-AELRDWSNEDLIKSIRDRFVTGNWSKAALRGQ----DADENGEDGEE 674

Query: 235 XXXEFEDLETGQKYESDHADDINDSMKDDTLAVEERR 345
              +FEDLETG+ + S     + D+ + D   VEERR
Sbjct: 675 IYGDFEDLETGEVHMS---QAVEDAERKDDPEVEERR 708


>tpg|DAA45216.1| TPA: hypothetical protein ZEAMMB73_557479 [Zea mays]
          Length = 725

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 48/97 (49%), Positives = 58/97 (59%)
 Frame = +1

Query: 55  DVNIDDCSKFVTDASLKDWKSEDLIASIRDRFVTGDWSKASLRNQLSXXXXXXXXXXXXX 234
           D++ +DCSKF   A LKDW +EDLI SIRDRFVTG+WSKA+LR Q               
Sbjct: 622 DIDGEDCSKFFK-AELKDWSNEDLIKSIRDRFVTGNWSKATLRGQ----DTDDRGEDDEE 676

Query: 235 XXXEFEDLETGQKYESDHADDINDSMKDDTLAVEERR 345
              +FEDLETG+ + +    D N   KDD   VEERR
Sbjct: 677 MYGDFEDLETGEVHMAQ--TDENVEAKDDP-EVEERR 710


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