BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00024080
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_974372.1| basic helix-loop-helix (bHLH) DNA-binding famil...    84   2e-14
ref|XP_002877136.1| transcription regulator [Arabidopsis lyrata ...    83   2e-14
ref|XP_002511555.1| DNA binding protein, putative [Ricinus commu...    82   6e-14
gb|AAM67002.1| DNA-binding protein-like [Arabidopsis thaliana]         81   8e-14
ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|...    80   1e-13

>ref|NP_974372.1| basic helix-loop-helix (bHLH) DNA-binding family protein
           [Arabidopsis thaliana] gi|9294226|dbj|BAB02128.1|
           DNA-binding protein-like [Arabidopsis thaliana]
           gi|88900306|gb|ABD57465.1| At3g28857 [Arabidopsis
           thaliana] gi|332643976|gb|AEE77497.1| basic
           helix-loop-helix (bHLH) DNA-binding family protein
           [Arabidopsis thaliana]
          Length = 92

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = +1

Query: 76  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 252
           +R+ +  SR S D++ DL+ KL+ FLP+ +   R DK    S+SKVL+ETC YI+KL +E
Sbjct: 6   SRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDK---VSASKVLQETCNYIRKLHRE 62

Query: 253 VDNLSDRLSQLVDSEDINGSDADIIR 330
           VDNLSDRLSQL+DS D +  +A +IR
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIR 88


>ref|XP_002877136.1| transcription regulator [Arabidopsis lyrata subsp. lyrata]
           gi|297322974|gb|EFH53395.1| transcription regulator
           [Arabidopsis lyrata subsp. lyrata]
          Length = 92

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = +1

Query: 76  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 252
           +R+++  SR S D++ DL+ KL+ FLP+     R DK    S+SKVL+ETC YI+KL +E
Sbjct: 6   SRQSSSASRISDDQMIDLVSKLRQFLPEIQERRRSDK---VSASKVLQETCNYIRKLHRE 62

Query: 253 VDNLSDRLSQLVDSEDINGSDADIIR 330
           VDNLSDRLSQL+DS D +  +A +IR
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIR 88


>ref|XP_002511555.1| DNA binding protein, putative [Ricinus communis]
           gi|223550670|gb|EEF52157.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 89

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = +1

Query: 70  MPNRRATRVSRFSQDELNDLIFKLQAFLPDNSTSRCDKNMAYSSSKVLKETCKYIKKLQK 249
           M +RR+   S+F+QDELNDL+ KLQA LP  +  +  +    S SK+L+ETC YI+ LQ 
Sbjct: 1   MSSRRSGAASKFTQDELNDLVLKLQALLPQLNQRQASR---VSVSKILQETCSYIRSLQS 57

Query: 250 EVDNLSDRLSQLVDSEDINGSDADIIR 330
           E D+LS++LSQL+DS +I   D + +R
Sbjct: 58  EADDLSEKLSQLLDSFNIADVDIETLR 84


>gb|AAM67002.1| DNA-binding protein-like [Arabidopsis thaliana]
          Length = 92

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = +1

Query: 76  NRRATRVSRFSQDELNDLIFKLQAFLPD-NSTSRCDKNMAYSSSKVLKETCKYIKKLQKE 252
           +R+ +  SR S D++ DL+ KL+ FLP+ +   R DK    S+S VL+ETC YI+KL +E
Sbjct: 6   SRQTSNASRISDDQMIDLVSKLRQFLPEIHERRRSDK---VSASXVLQETCNYIRKLHRE 62

Query: 253 VDNLSDRLSQLVDSEDINGSDADIIR 330
           VDNLSDRLSQL+DS D +  +A +IR
Sbjct: 63  VDNLSDRLSQLLDSVDEDSPEAAVIR 88


>ref|NP_001152393.1| DNA binding protein [Zea mays] gi|195655845|gb|ACG47390.1| DNA
           binding protein [Zea mays] gi|223944863|gb|ACN26515.1|
           unknown [Zea mays] gi|413924559|gb|AFW64491.1| putative
           HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 90

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = +1

Query: 70  MPNRRATRVSRFSQDELNDLIFKLQAFLPDNSTSRCDKNMAYSSSKVLKETCKYIKKLQK 249
           M +RR++     S+DE+N+L+ KLQA LP +   R       S++K+LKETC YIK LQ+
Sbjct: 1   MSSRRSSSHGNISEDEMNELVSKLQALLPSSRRRRGSGQA--STAKLLKETCSYIKSLQR 58

Query: 250 EVDNLSDRLSQLVDSEDINGSDADIIR 330
           EVD+LSDRLS L+ + D N   A+IIR
Sbjct: 59  EVDDLSDRLSDLLSTMDHNSPAAEIIR 85