BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023961
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   380   e-103
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   380   e-103
ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containi...   367   2e-99
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...   362   7e-98
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ...   350   3e-94

>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  380 bits (977), Expect = e-103
 Identities = 181/278 (65%), Positives = 227/278 (81%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDSM 181
            +  TYGVLM GLC+  +VDEAR LL KVP PN VLFNT+INGY++ G  +EAKAV+ +SM
Sbjct: 339  NSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESM 398

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
            +  G  PDI+TYN +I GLCKKG+L SA  L++E+ +KGC+PNVITYTILID FCK+GRL
Sbjct: 399  LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 458

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
            +EA NV+ EMS KGL+LN VGYNCLISALC++ +V++A+ +F +M  +GCK DIFTFNSL
Sbjct: 459  EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 518

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGC 721
            I+GL K+++ EEAL +Y+DM L+GVIANT+TYNTLIHAFL++ A  EA KLVNDMLFRGC
Sbjct: 519  IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 578

Query: 722  PLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
            PLD+ TY+GLIKALC  G +EK +ALF +M SKGL  N
Sbjct: 579  PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 616



 Score =  169 bits (427), Expect = 9e-40
 Identities = 100/276 (36%), Positives = 158/276 (57%), Gaps = 5/276 (1%)
 Frame = +2

Query: 11   TYGVLMQGLCKTSQVDEARALLKKVPK----PNAVLFNTVINGYIAHGCFEEAKAVLDDS 178
            T+GV+M+ LC  ++VD A ALLK + +    PNA+++ T+I+     G   E   +L++ 
Sbjct: 237  TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEE- 295

Query: 179  MVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGR 358
            M+  G  PD+ T+N  IHGLCK   +  A +LVD + L+G  PN  TY +L+ G C+ G+
Sbjct: 296  MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 355

Query: 359  LKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQ-LFRNMLREGCKADIFTFN 535
            + EA  ++ ++       N V +N LI+      R++EA   +  +ML  GC  DIFT+N
Sbjct: 356  VDEARMLLNKVPNP----NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 411

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
            +LI GL K   +  A ++  +M + G   N +TY  LI  F K+    EA  ++++M  +
Sbjct: 412  TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 471

Query: 716  GCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKG 823
            G  L+   Y+ LI ALC+D  V+ A+ +F +M SKG
Sbjct: 472  GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 507



 Score =  150 bits (378), Expect = 4e-34
 Identities = 96/316 (30%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVP----KPNAVLFNTVINGYIAHGCFEEAKAVL 169
            D  TY  L+ GLCK   +  AR L+ ++     +PN + +  +I+ +   G  EEA+ VL
Sbjct: 406  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465

Query: 170  DD----------------------------------SMVRAGYHPDIYTYNIVIHGLCKK 247
            D+                                   M   G  PDI+T+N +I GLCK 
Sbjct: 466  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 248  GFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGY 427
                 A  L  ++ L+G   N ITY  LI  F ++G ++EA  ++ +M  +G  L+ + Y
Sbjct: 526  NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585

Query: 428  NCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFL 607
            N LI ALCR   +E+ + LF +M+ +G   +  + N LI GL +   ++ AL+  RDM  
Sbjct: 586  NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645

Query: 608  DGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEK 787
             G+  + VTYN+LI+   K     EA  L + +   G   D  TY+ LI   C++G  + 
Sbjct: 646  RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 705

Query: 788  AMALFAEMWSKGLTAN 835
            A  L +     G   N
Sbjct: 706  AHLLLSRGVDSGFIPN 721



 Score =  145 bits (366), Expect = 1e-32
 Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 4/263 (1%)
 Frame = +2

Query: 8    ITYGVLMQGLCKTSQVDEARALL----KKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDD 175
            + Y  L+  LCK  +V +A  +      K  KP+   FN++I G      FEEA  +  D
Sbjct: 478  VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 176  SMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKG 355
             M+  G   +  TYN +IH   ++G +  A +LV+++  +GC  + ITY  LI   C+ G
Sbjct: 538  -MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 356  RLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFN 535
             +++   +  +M  KGL+ N +  N LI+ LCR   ++ A++  R+M+  G   DI T+N
Sbjct: 597  NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
            SLI GL K  R +EAL ++  + ++G+  + +TYNTLI    K+  + +A  L++  +  
Sbjct: 657  SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 716

Query: 716  GCPLDEFTYSGLIKALCEDGAVE 784
            G   +E T+  L+    ++G  E
Sbjct: 717  GFIPNEVTWYILVSNFIKEGDQE 739



 Score =  114 bits (284), Expect = 4e-23
 Identities = 62/176 (35%), Positives = 92/176 (52%)
 Frame = +2

Query: 272 LVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGYNCLISALC 451
           L+D   +  C+P   +Y +++D        K   NV YEM  KG+S     +  ++ ALC
Sbjct: 187 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 246

Query: 452 RECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTV 631
               V+ A  L ++M R GC  +   + +LI+ L+K+ R+ E LK+  +M L G I +  
Sbjct: 247 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306

Query: 632 TYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEKAMAL 799
           T+N  IH   K    HEA KLV+ ML RG   + FTY  L+  LC  G V++A  L
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 362



 Score =  109 bits (272), Expect = 9e-22
 Identities = 88/310 (28%), Positives = 128/310 (41%), Gaps = 36/310 (11%)
 Frame = +2

Query: 14   YGVLMQGLCKTSQVDEARALLKKVPKPNAV----LFNTVINGYIAHGCFEEAKAVLDDSM 181
            Y +L+  L    +     ALL ++ +   V    LF  ++  Y   G   +A  +L D  
Sbjct: 132  YYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 191

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
                  P   +YN+V+  L           +  E+  KG  P V T+ +++   C    +
Sbjct: 192  GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 251

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
              A  ++ +M+R G   N + Y  LI AL +  RV E ++L   ML  GC  D+ TFN  
Sbjct: 252  DSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 311

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVN------- 700
            I+GL K+ R+ EA K+   M L G   N+ TY  L+H   +     EA  L+N       
Sbjct: 312  IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 371

Query: 701  -------------------------DMLFRGCPLDEFTYSGLIKALCEDGAVEKAMALFA 805
                                      ML  GC  D FTY+ LI  LC+ G +  A  L  
Sbjct: 372  VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 806  EMWSKGLTAN 835
            EM  KG   N
Sbjct: 432  EMQIKGCEPN 441



 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 1/216 (0%)
 Frame = +2

Query: 191 GYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRLKEA 370
           GY      Y ++I  L   G   +   L+ ++  +G       + +++  + + G   +A
Sbjct: 124 GYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQA 183

Query: 371 ENVMYEMSRKGLSLNTV-GYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIY 547
             ++ +M        T   YN ++  L      +    +F  ML +G    ++TF  ++ 
Sbjct: 184 TRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMK 243

Query: 548 GLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPL 727
            L  ++ ++ A  + +DM   G + N + Y TLIHA  K    +E  KL+ +ML  GC  
Sbjct: 244 ALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIP 303

Query: 728 DEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
           D  T++  I  LC+   + +A  L   M  +G T N
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPN 339


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  380 bits (977), Expect = e-103
 Identities = 181/278 (65%), Positives = 227/278 (81%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDSM 181
            +  TYGVLM GLC+  +VDEAR LL KVP PN VLFNT+INGY++ G  +EAKAV+ +SM
Sbjct: 321  NSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESM 380

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
            +  G  PDI+TYN +I GLCKKG+L SA  L++E+ +KGC+PNVITYTILID FCK+GRL
Sbjct: 381  LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 440

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
            +EA NV+ EMS KGL+LN VGYNCLISALC++ +V++A+ +F +M  +GCK DIFTFNSL
Sbjct: 441  EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGC 721
            I+GL K+++ EEAL +Y+DM L+GVIANT+TYNTLIHAFL++ A  EA KLVNDMLFRGC
Sbjct: 501  IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 560

Query: 722  PLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
            PLD+ TY+GLIKALC  G +EK +ALF +M SKGL  N
Sbjct: 561  PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN 598



 Score =  169 bits (428), Expect = 7e-40
 Identities = 100/276 (36%), Positives = 158/276 (57%), Gaps = 5/276 (1%)
 Frame = +2

Query: 11   TYGVLMQGLCKTSQVDEARALLKKVPK----PNAVLFNTVINGYIAHGCFEEAKAVLDDS 178
            T+GV+M+ LC  ++VD A ALLK + +    PNA+++ T+I+     G   E   +L++ 
Sbjct: 219  TFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEE- 277

Query: 179  MVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGR 358
            M+  G  PD+ T+N  IHGLCK   +  A +LVD + L+G  PN  TY +L+ G C+ G+
Sbjct: 278  MLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGK 337

Query: 359  LKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQ-LFRNMLREGCKADIFTFN 535
            + EA  ++ ++       N V +N LI+      R++EA   +  +ML  GC  DIFT+N
Sbjct: 338  VDEARMLLNKVPNP----NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYN 393

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
            +LI GL K   +  A ++  +M + G   N +TY  LI  F K+    EA  ++++M  +
Sbjct: 394  TLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGK 453

Query: 716  GCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKG 823
            G  L+   Y+ LI ALC+D  V+ A+ +F +M SKG
Sbjct: 454  GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKG 489



 Score =  150 bits (378), Expect = 4e-34
 Identities = 96/316 (30%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVP----KPNAVLFNTVINGYIAHGCFEEAKAVL 169
            D  TY  L+ GLCK   +  AR L+ ++     +PN + +  +I+ +   G  EEA+ VL
Sbjct: 388  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447

Query: 170  DD----------------------------------SMVRAGYHPDIYTYNIVIHGLCKK 247
            D+                                   M   G  PDI+T+N +I GLCK 
Sbjct: 448  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 248  GFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGY 427
                 A  L  ++ L+G   N ITY  LI  F ++G ++EA  ++ +M  +G  L+ + Y
Sbjct: 508  NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567

Query: 428  NCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFL 607
            N LI ALCR   +E+ + LF +M+ +G   +  + N LI GL +   ++ AL+  RDM  
Sbjct: 568  NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627

Query: 608  DGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEK 787
             G+  + VTYN+LI+   K     EA  L + +   G   D  TY+ LI   C++G  + 
Sbjct: 628  RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 687

Query: 788  AMALFAEMWSKGLTAN 835
            A  L +     G   N
Sbjct: 688  AHLLLSRGVDSGFIPN 703



 Score =  145 bits (366), Expect = 1e-32
 Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 4/263 (1%)
 Frame = +2

Query: 8    ITYGVLMQGLCKTSQVDEARALL----KKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDD 175
            + Y  L+  LCK  +V +A  +      K  KP+   FN++I G      FEEA  +  D
Sbjct: 460  VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 176  SMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKG 355
             M+  G   +  TYN +IH   ++G +  A +LV+++  +GC  + ITY  LI   C+ G
Sbjct: 520  -MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 356  RLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFN 535
             +++   +  +M  KGL+ N +  N LI+ LCR   ++ A++  R+M+  G   DI T+N
Sbjct: 579  NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
            SLI GL K  R +EAL ++  + ++G+  + +TYNTLI    K+  + +A  L++  +  
Sbjct: 639  SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 698

Query: 716  GCPLDEFTYSGLIKALCEDGAVE 784
            G   +E T+  L+    ++G  E
Sbjct: 699  GFIPNEVTWYILVSNFIKEGDQE 721



 Score =  113 bits (282), Expect = 6e-23
 Identities = 62/176 (35%), Positives = 91/176 (51%)
 Frame = +2

Query: 272 LVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGYNCLISALC 451
           L+D   +  C+P   +Y +++D        K   NV YEM  KG+S     +  ++ ALC
Sbjct: 169 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 228

Query: 452 RECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTV 631
               V+ A  L ++M R GC  +   + +LI+ L K+ R+ E LK+  +M L G I +  
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288

Query: 632 TYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEKAMAL 799
           T+N  IH   K    HEA KLV+ ML RG   + FTY  L+  LC  G V++A  L
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML 344



 Score =  108 bits (271), Expect = 1e-21
 Identities = 88/310 (28%), Positives = 128/310 (41%), Gaps = 36/310 (11%)
 Frame = +2

Query: 14   YGVLMQGLCKTSQVDEARALLKKVPKPNAV----LFNTVINGYIAHGCFEEAKAVLDDSM 181
            Y +L+  L    +     ALL ++ +   V    LF  ++  Y   G   +A  +L D  
Sbjct: 114  YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 173

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
                  P   +YN+V+  L           +  E+  KG  P V T+ +++   C    +
Sbjct: 174  GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 233

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
              A  ++ +M+R G   N + Y  LI AL +  RV E ++L   ML  GC  D+ TFN  
Sbjct: 234  DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 293

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVN------- 700
            I+GL K+ R+ EA K+   M L G   N+ TY  L+H   +     EA  L+N       
Sbjct: 294  IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNV 353

Query: 701  -------------------------DMLFRGCPLDEFTYSGLIKALCEDGAVEKAMALFA 805
                                      ML  GC  D FTY+ LI  LC+ G +  A  L  
Sbjct: 354  VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 806  EMWSKGLTAN 835
            EM  KG   N
Sbjct: 414  EMQIKGCEPN 423


>ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
            mitochondrial-like [Glycine max]
          Length = 725

 Score =  367 bits (942), Expect = 2e-99
 Identities = 179/275 (65%), Positives = 220/275 (80%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDSM 181
            D +TYG LM GLC+  QVDEARALL K+P PN VL+NT+I+GY+A G FEEAK +L ++M
Sbjct: 309  DALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNM 368

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
            V AGY PD YT+NI+I GL KKG+L SA  L++E+  K  +PNVITYTILI+GFCK+GRL
Sbjct: 369  VIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRL 428

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
            +EA  ++  MS KGLSLNTVGYNCLI ALC++  +EEA+QLF  M  +GCK DI+TFNSL
Sbjct: 429  EEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSL 488

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGC 721
            I GL K  +MEEAL +Y DMFL+GVIANTVTYNTL+HAFL + +  +AFKLV++MLFRGC
Sbjct: 489  INGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGC 548

Query: 722  PLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGL 826
            PLD  TY+GLIKALC+ GAVEK + LF EM  KG+
Sbjct: 549  PLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583



 Score =  176 bits (445), Expect = 8e-42
 Identities = 103/276 (37%), Positives = 158/276 (57%), Gaps = 5/276 (1%)
 Frame = +2

Query: 11   TYGVLMQGLCKTSQVDEARALLKKVPK----PNAVLFNTVINGYIAHGCFEEAKAVLDDS 178
            T+GV+M+ LC  S+VD A +LL+ + K    PN+V++ T+I+    +    EA  +L+D 
Sbjct: 207  TFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDM 266

Query: 179  MVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGR 358
             +     PD+ T+N VIHGLC+ G +  A +L+D + L+G   + +TY  L+ G C+ G+
Sbjct: 267  FLMC-CEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQ 325

Query: 359  LKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQ-LFRNMLREGCKADIFTFN 535
            + EA  ++ ++       NTV YN LIS      R EEA   L+ NM+  G + D +TFN
Sbjct: 326  VDEARALLNKIPNP----NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFN 381

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
             +I GL K   +  AL++  +M       N +TY  LI+ F K+    EA ++VN M  +
Sbjct: 382  IMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441

Query: 716  GCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKG 823
            G  L+   Y+ LI ALC+DG +E+A+ LF EM  KG
Sbjct: 442  GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477



 Score =  150 bits (379), Expect = 3e-34
 Identities = 93/280 (33%), Positives = 141/280 (50%), Gaps = 4/280 (1%)
 Frame = +2

Query: 8    ITYGVLMQGLCKTSQVDEARALLKKVPKP----NAVLFNTVINGYIAHGCFEEAKAVLDD 175
            ITY +L+ G CK  +++EA  ++  +       N V +N +I      G  EEA  +  +
Sbjct: 413  ITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGE 472

Query: 176  SMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKG 355
             M   G  PDIYT+N +I+GLCK   +  A  L  ++ L+G   N +TY  L+  F  + 
Sbjct: 473  -MSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRD 531

Query: 356  RLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFN 535
             +++A  ++ EM  +G  L+ + YN LI ALC+   VE+ + LF  ML +G    I + N
Sbjct: 532  SIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN 591

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
             LI GL +  ++ +ALK  +DM   G+  + VTYN+LI+   K     EA  L N +   
Sbjct: 592  ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651

Query: 716  GCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
            G   D  TY+ LI   C +G    A  L  +    G   N
Sbjct: 652  GIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPN 691



 Score =  139 bits (351), Expect = 6e-31
 Identities = 82/253 (32%), Positives = 136/253 (53%), Gaps = 4/253 (1%)
 Frame = +2

Query: 8    ITYGVLMQGLCKTSQVDEARALLKKVP----KPNAVLFNTVINGYIAHGCFEEAKAVLDD 175
            + Y  L+  LCK   ++EA  L  ++     KP+   FN++ING   +   EEA ++  D
Sbjct: 448  VGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHD 507

Query: 176  SMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKG 355
             M   G   +  TYN ++H    +  +  A++LVDE+  +GC  + ITY  LI   CK G
Sbjct: 508  -MFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566

Query: 356  RLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFN 535
             +++   +  EM  KG+    +  N LIS LCR  +V +A++  ++M+  G   DI T+N
Sbjct: 567  AVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYN 626

Query: 536  SLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFR 715
            SLI GL K+  ++EA  ++  +  +G+  + +TYNTLI     +  +++A  L+   +  
Sbjct: 627  SLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDS 686

Query: 716  GCPLDEFTYSGLI 754
            G   +E T+S LI
Sbjct: 687  GFIPNEVTWSILI 699



 Score =  106 bits (264), Expect = 7e-21
 Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 5/191 (2%)
 Frame = +2

Query: 242 KKGFLSSAYRLV-DEISLKGCKPNVITYT----ILIDGFCKKGRLKEAENVMYEMSRKGL 406
           K G    A RL+ D   +  C P   +Y     IL+DG C +     A NV Y+M  +G+
Sbjct: 146 KAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPR----VAPNVFYDMLSRGV 201

Query: 407 SLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALK 586
           S     +  ++ ALC    V+ A  L R+M + GC  +   + +LI+ L + +R+ EAL+
Sbjct: 202 SPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQ 261

Query: 587 VYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALC 766
           +  DMFL     +  T+N +IH   +    HEA KL++ ML RG   D  TY  L+  LC
Sbjct: 262 LLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLC 321

Query: 767 EDGAVEKAMAL 799
             G V++A AL
Sbjct: 322 RMGQVDEARAL 332



 Score =  100 bits (250), Expect = 3e-19
 Identities = 76/276 (27%), Positives = 122/276 (44%), Gaps = 32/276 (11%)
 Frame = +2

Query: 104 LFNTVINGYIAHGCFEEAKAVLDDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDE 283
           LF  ++  Y   G   +A  +L D        P   +YN+V+  L        A  +  +
Sbjct: 136 LFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYD 195

Query: 284 ISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECR 463
           +  +G  P V T+ +++   C    +  A +++ +M++ G   N+V Y  LI ALC   R
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255

Query: 464 VEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFLDGVIA------- 622
           V EA+QL  +M    C+ D+ TFN +I+GL +  R+ EA K+   M L G          
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315

Query: 623 ------------------------NTVTYNTLIHAFLKKKAYHEAFKLV-NDMLFRGCPL 727
                                   NTV YNTLI  ++    + EA  L+ N+M+  G   
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375

Query: 728 DEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
           D +T++ +I  L + G +  A+ L  EM +K    N
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPN 411



 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 38/224 (16%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKV----PKPNAVLFNTVINGYIAHGCFEEAKAVL 169
            D  T+  L+ GLCK  +++EA +L   +       N V +NT+++ ++     ++A  ++
Sbjct: 481  DIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540

Query: 170  DDSMVRA----------------------------------GYHPDIYTYNIVIHGLCKK 247
            D+ + R                                   G  P I + NI+I GLC+ 
Sbjct: 541  DEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRT 600

Query: 248  GFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGY 427
            G ++ A + + ++  +G  P+++TY  LI+G CK G ++EA N+  ++  +G+  + + Y
Sbjct: 601  GKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660

Query: 428  NCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTK 559
            N LIS  C E    +A  L    +  G   +  T++ LI  + K
Sbjct: 661  NTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPK----PNAVLFNTVINGYIAHGCFEEAKAVL 169
            D+ITY  L++ LCKT  V++   L +++      P  +  N +I+G    G   +A   L
Sbjct: 551  DNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFL 610

Query: 170  DDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCK 349
             D M+  G  PDI TYN +I+GLCK G +  A  L +++  +G +P+ ITY  LI   C 
Sbjct: 611  QD-MIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCH 669

Query: 350  KGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRE 457
            +G   +A  ++Y+    G   N V ++ LI+ + ++
Sbjct: 670  EGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
            predicted protein [Populus trichocarpa]
          Length = 724

 Score =  362 bits (928), Expect = 7e-98
 Identities = 171/276 (61%), Positives = 217/276 (78%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDSM 181
            +D+TYG LM GLCKT ++DEA+ALL KVP PN V FNT++NG++ +G   EA A + D M
Sbjct: 314  NDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
            +  GY PD++T++ +++GLCKKG   SA  LV+++  KGCKPN+ TYTILIDGFCKKG+L
Sbjct: 374  INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
            +EA  ++ EM  KG SLNTVGYN LISALC+  ++ EA+ +F  M  +GCK DIFTFNSL
Sbjct: 434  EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGC 721
            I+GL ++D ME+AL +YRDM L+GVIAN+VT+NTLIHAFL++    EA KLVNDMLFRGC
Sbjct: 494  IFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC 553

Query: 722  PLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLT 829
            PLDE TY+GLIKALC+ GAVEK + LF EM  KGLT
Sbjct: 554  PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589



 Score =  167 bits (423), Expect = 3e-39
 Identities = 92/279 (32%), Positives = 151/279 (54%), Gaps = 4/279 (1%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVP----KPNAVLFNTVINGYIAHGCFEEAKAVL 169
            D  T+  L+ GLCK      A  L+  +     KPN   +  +I+G+   G  EEA  +L
Sbjct: 381  DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 170  DDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCK 349
             + M+  G+  +   YN +I  LCK G +  A  +  E+S KGCKP++ T+  LI G C+
Sbjct: 441  RE-MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 350  KGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFT 529
               +++A  +  +M  +G+  N+V +N LI A  R   ++EA++L  +ML  GC  D  T
Sbjct: 500  VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEIT 559

Query: 530  FNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDML 709
            +N LI  L K   +E+ L ++ +M   G+  + +T N LI+ F      H A + + DM+
Sbjct: 560  YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619

Query: 710  FRGCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGL 826
             RG   D  TY+ LI  LC+ G +++A+ LF ++ ++G+
Sbjct: 620  HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGI 658



 Score =  164 bits (414), Expect = 3e-38
 Identities = 97/279 (34%), Positives = 155/279 (55%), Gaps = 5/279 (1%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPK----PNAVLFNTVINGYIAHGCFEEAKAVL 169
            +D T+G++M+ LC  ++VD A  LL+ + K    PN++++ T+I+        +EA  +L
Sbjct: 209  NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 170  DDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCK 349
            ++ M   G  PD+ T+N VI+G C+   +    +LVD + LKG  PN +TY  L+ G CK
Sbjct: 269  EE-MFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327

Query: 350  KGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQ-LFRNMLREGCKADIF 526
              R+ EA+ ++ ++       N V +N L++   R  R+ EA   ++  M+  G   D+F
Sbjct: 328  TCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVF 383

Query: 527  TFNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDM 706
            TF++L+ GL K      AL++  DM   G   N  TY  LI  F KK    EA  ++ +M
Sbjct: 384  TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 707  LFRGCPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKG 823
            L +G  L+   Y+ LI ALC+ G + +A+ +F EM SKG
Sbjct: 444  LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482



 Score =  157 bits (398), Expect = 2e-36
 Identities = 96/279 (34%), Positives = 142/279 (50%), Gaps = 4/279 (1%)
 Frame = +2

Query: 11   TYGVLMQGLCKTSQVDEA----RALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDS 178
            TY +L+ G CK  Q++EA    R +L K    N V +N +I+    HG   EA  +  + 
Sbjct: 419  TYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE- 477

Query: 179  MVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGR 358
            M   G  PDI+T+N +I GLC+   +  A  L  ++ L+G   N +T+  LI  F ++G 
Sbjct: 478  MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 359  LKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNS 538
            ++EA  ++ +M  +G  L+ + YN LI ALC+   VE+ + LF  M+R+G    I T N 
Sbjct: 538  IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597

Query: 539  LIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRG 718
            LI G     ++  AL+  RDM   G   + VTYN+LI+   K+    EA  L   +   G
Sbjct: 598  LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 719  CPLDEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
               D  TY+ LI  LC +GA + A  L       G   N
Sbjct: 658  IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPN 696



 Score =  136 bits (343), Expect = 5e-30
 Identities = 78/226 (34%), Positives = 128/226 (56%), Gaps = 4/226 (1%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKP----NAVLFNTVINGYIAHGCFEEAKAVL 169
            D  T+  L+ GLC+  ++++A AL + +       N+V FNT+I+ ++  G  +EA  ++
Sbjct: 486  DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLV 545

Query: 170  DDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCK 349
            +D + R G   D  TYN +I  LCK G +     L +E+  KG  P++IT  ILI+GFC 
Sbjct: 546  NDMLFR-GCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCT 604

Query: 350  KGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFT 529
             G++  A   M +M  +G S + V YN LI+ LC+  R++EA+ LF  +  EG + D  T
Sbjct: 605  AGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSIT 664

Query: 530  FNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKK 667
            +N+LI  L +    ++A  +      +G + N VT+N L++ F K+
Sbjct: 665  YNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQ 710



 Score =  107 bits (267), Expect = 3e-21
 Identities = 62/193 (32%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
 Frame = +2

Query: 242 KKGFLSSAYRLVDEISLKG---CKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSL 412
           + G    A RL+  + +KG   C+P+  +Y +++D          A NV Y+M  KG+S 
Sbjct: 151 RAGLPGQATRLL--LDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSP 208

Query: 413 NTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVY 592
           N   +  ++ ALC    V+ A  L R+M + GC  +   + +LI  L+K DR++EALK+ 
Sbjct: 209 NDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLL 268

Query: 593 RDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCED 772
            +MFL G   +  T+NT+I+ F +     E  KLV+ M+ +G   ++ TY  L+  LC+ 
Sbjct: 269 EEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKT 328

Query: 773 GAVEKAMALFAEM 811
             +++A AL +++
Sbjct: 329 CRIDEAQALLSKV 341



 Score =  105 bits (263), Expect = 1e-20
 Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 32/276 (11%)
 Frame = +2

Query: 104 LFNTVINGYIAHGCFEEAKAVLDDSMVRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDE 283
           LF  ++  Y   G   +A  +L D        P   +YN+V+  L      S A  +  +
Sbjct: 141 LFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYD 200

Query: 284 ISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGYNCLISALCRECR 463
           +  KG  PN  T+ +++   C    +  A  ++ +M++ G   N++ Y  LI AL +  R
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 464 VEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFLDGVIANTVTY-- 637
           V+EA++L   M   GC  D+ TFN++IYG  +++R+ E  K+   M L G   N +TY  
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 638 -----------------------------NTLIHAFLKKKAYHEAFKLVND-MLFRGCPL 727
                                        NTL++ F++    +EA   V D M+  G   
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 728 DEFTYSGLIKALCEDGAVEKAMALFAEMWSKGLTAN 835
           D FT+S L+  LC+ G    A+ L  +M +KG   N
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPN 416



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 7/200 (3%)
 Frame = +2

Query: 257 SSAYRLVDEISLKGCKPNVI----TYTILIDGFCKKGRLKEAENVMYEMSRKGLSL---N 415
           ++ ++++D + L+  +  ++     + +++  + + G   +A  ++ +M  KG+     +
Sbjct: 117 AAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM--KGVYCCEPS 174

Query: 416 TVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYR 595
              YN ++  L        A  +F +ML +G   + +TF  ++  L  ++ ++ A  + R
Sbjct: 175 FRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLR 234

Query: 596 DMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDG 775
           DM   G + N++ Y TLI A  K+    EA KL+ +M   GCP D  T++ +I   C   
Sbjct: 235 DMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLN 294

Query: 776 AVEKAMALFAEMWSKGLTAN 835
            V +   L   M  KG T N
Sbjct: 295 RVLEGAKLVDRMILKGFTPN 314


>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
            gi|355518643|gb|AET00267.1| Auxin response factor
            [Medicago truncatula]
          Length = 948

 Score =  350 bits (897), Expect = 3e-94
 Identities = 167/273 (61%), Positives = 212/273 (77%)
 Frame = +2

Query: 2    DDITYGVLMQGLCKTSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVLDDSM 181
            D +  G LM GLC+  +VDEARA+L K+P PN VL+NT+INGY+  G FEEAK +L  +M
Sbjct: 304  DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNM 363

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
            V AG+ PD +T+NI+I GLCKKG+L SA   +DE+  KG +PNVITYTILIDGFCK+G  
Sbjct: 364  VIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHF 423

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
            +EA  V+  MS KGLSLNTVGYNCLI ALC++ ++++A+Q++  M  +GCK DI+TFNSL
Sbjct: 424  EEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483

Query: 542  IYGLTKIDRMEEALKVYRDMFLDGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGC 721
            IYGL K D+MEEAL +YRDM L+GVIANTVTYNTLIHAFL+ +   +A KLV +M FRGC
Sbjct: 484  IYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC 543

Query: 722  PLDEFTYSGLIKALCEDGAVEKAMALFAEMWSK 820
            PLD  TY+GLIKALC+ GA EK + L  +M+ +
Sbjct: 544  PLDNITYNGLIKALCKTGATEKCLGLIEQMFGE 576



 Score =  143 bits (360), Expect = 5e-32
 Identities = 93/316 (29%), Positives = 148/316 (46%), Gaps = 38/316 (12%)
 Frame = +2

Query: 2    DDITYGVLMQGLCK----TSQVDEARALLKKVPKPNAVLFNTVINGYIAHGCFEEAKAVL 169
            D  T+ +++ GLCK     S ++    ++KK  +PN + +  +I+G+   G FEEA  V+
Sbjct: 371  DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430

Query: 170  DD------SMVRAGYH----------------------------PDIYTYNIVIHGLCKK 247
            +       S+   GY+                            PDIYT+N +I+GLCK 
Sbjct: 431  NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490

Query: 248  GFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGY 427
              +  A  L  ++ L+G   N +TY  LI  F +   +++A+ ++ EM  +G  L+ + Y
Sbjct: 491  DKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITY 550

Query: 428  NCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFL 607
            N LI ALC+    E+ + L   M  E     I + N LI    +  ++ +AL+  RDM  
Sbjct: 551  NGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQ 610

Query: 608  DGVIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEK 787
             G+  + VTYN+LI+   K   + EA  L N +  +G   D  TY+ LI   C +G    
Sbjct: 611  RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670

Query: 788  AMALFAEMWSKGLTAN 835
            A  L  +  S G   N
Sbjct: 671  ACQLLFKGVSNGFIPN 686



 Score =  112 bits (279), Expect = 1e-22
 Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 36/310 (11%)
 Frame = +2

Query: 14   YGVLMQGLCKTSQVDEARALLKKVPKPNAV----LFNTVINGYIAHGCFEEAKAVLDDSM 181
            Y +L+  L    +      LLK++     V    LF  ++  Y   G   +A  +L D  
Sbjct: 97   YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156

Query: 182  VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGCKPNVITYTILIDGFCKKGRL 361
                + P   +YN+V+  L        A  +  ++  +G  P V T+ +++  FC    +
Sbjct: 157  GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216

Query: 362  KEAENVMYEMSRKGLSLNTVGYNCLISALCRECRVEEAMQLFRNMLREGCKADIFTFNSL 541
              A +++ +M++ G   N++ Y  LI AL    RV EAM+L   M   GC+ D+ TFN +
Sbjct: 217  DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDV 276

Query: 542  IYGLTKIDRMEEALKVY-----RDMFLDGVI--------------------------ANT 628
            I+GL K  R+ EA K++     RD   D +I                           NT
Sbjct: 277  IHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNT 336

Query: 629  VTYNTLIHAFLKKKAYHEAFKLV-NDMLFRGCPLDEFTYSGLIKALCEDGAVEKAMALFA 805
            V YNTLI+ ++    + EA  L+  +M+  G   D FT++ +I  LC+ G +  A+    
Sbjct: 337  VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLD 396

Query: 806  EMWSKGLTAN 835
            EM  KG   N
Sbjct: 397  EMVKKGFEPN 406



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
 Frame = +2

Query: 182 VRAGYHPDIYTYNIVIHGLCKKGFLSSAYRLVDEISLKGC-------------------- 301
           ++ GY    + Y ++I  L   G      +L+ ++  +GC                    
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 302 ----------------KPNVITYTILIDGFCKKGRLKEAENVMYEMSRKGLSLNTVGYNC 433
                           +P   +Y ++++        K A NV Y+M  +G+S     +  
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGV 205

Query: 434 LISALCRECRVEEAMQLFRNMLREGCKADIFTFNSLIYGLTKIDRMEEALKVYRDMFLDG 613
           ++ A C    V+ A  L R+M + GC  +   +  LI+ L++ +R+ EA+K+  +MFL G
Sbjct: 206 VMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG 265

Query: 614 VIANTVTYNTLIHAFLKKKAYHEAFKLVNDMLFRGCPLDEFTYSGLIKALCEDGAVEKAM 793
              +  T+N +IH   K    HEA KL + ML R    D      L+  LC  G V++A 
Sbjct: 266 CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325

Query: 794 ALFAEM 811
           A+ +++
Sbjct: 326 AMLSKI 331