BLASTX nr result

ID: Scutellaria24_contig00023935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023935
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|NP_565417.1| auxin efflux carrier-like protein [Arabidopsis ...    70   1e-10
ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus ...    69   3e-10
gb|AAM60930.1| unknown [Arabidopsis thaliana]                          69   4e-10
ref|XP_002884062.1| auxin efflux carrier family protein [Arabido...    67   2e-09

>ref|XP_002306421.1| predicted protein [Populus trichocarpa] gi|222855870|gb|EEE93417.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = +2

Query: 2   VCRVAALSYVSFSMAIGSLYTWTYTYHLIQSANNKYRAKVDDDDDVMIKSIKEPNIIDFD 181
           +C    LSY SFSMA+G  + WTYT+HLI+++  K +A        ++++ K PN  DFD
Sbjct: 140 ICTSVGLSYASFSMALGGFFIWTYTFHLIRTSAAKLKAL-----QAVVEASKAPN-NDFD 193

Query: 182 ANEIKTLLLNGSLIDVKEDDHTIIHPK-SATKRNPIFAIFHQILEELMAPPVLAA 343
           A++   L     LI   +++  I H K + +    +    HQILEEL+ PP +AA
Sbjct: 194 ASQETHL-----LIGQDQENVAIEHGKGNVSSWTKLIGFLHQILEELLEPPTIAA 243


>ref|NP_565417.1| auxin efflux carrier-like protein [Arabidopsis thaliana]
           gi|30680004|ref|NP_849964.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|42570811|ref|NP_973479.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|79322403|ref|NP_001031363.1| auxin efflux
           carrier-like protein [Arabidopsis thaliana]
           gi|4914371|gb|AAD32907.1| expressed protein [Arabidopsis
           thaliana] gi|110740748|dbj|BAE98473.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330251540|gb|AEC06634.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|330251541|gb|AEC06635.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|330251542|gb|AEC06636.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
           gi|330251543|gb|AEC06637.1| auxin efflux carrier-like
           protein [Arabidopsis thaliana]
          Length = 396

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/114 (37%), Positives = 65/114 (57%)
 Frame = +2

Query: 2   VCRVAALSYVSFSMAIGSLYTWTYTYHLIQSANNKYRAKVDDDDDVMIKSIKEPNIIDFD 181
           VCR   LSY SFSMA+G  Y WTYT+ LI+ +  K +A +++ + + IKS       D +
Sbjct: 140 VCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMKVQA-IEESEKIAIKSSNS----DLE 194

Query: 182 ANEIKTLLLNGSLIDVKEDDHTIIHPKSATKRNPIFAIFHQILEELMAPPVLAA 343
           A+  KT LL       ++ ++ ++  K+   R  +    H+ILEEL+APP L A
Sbjct: 195 ADH-KTHLLGAP----EDKENKVVKEKTGFWRKGV-DFLHEILEELLAPPTLGA 242


>ref|XP_002521739.1| auxin:hydrogen symporter, putative [Ricinus communis]
           gi|223539130|gb|EEF40726.1| auxin:hydrogen symporter,
           putative [Ricinus communis]
          Length = 406

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   CRVAALSYVSFSMAIGSLYTWTYTYHLIQSANNKYRAKVDDDDDVMIKSIKEPNIIDFDA 184
           C+   LSY SFSMAIG  Y WTYTYHLI+++  K RA   +++     + K PN  D +A
Sbjct: 141 CKSIGLSYASFSMAIGGFYIWTYTYHLIRTSATKLRAIQAEEE-----ASKAPN-KDLEA 194

Query: 185 NEIKTLLLNG--------SLIDVKEDDHTIIHPKSATKRNPIFAIFHQILEELMAPPVLA 340
              +T LL G        S+  +K  D     P S+  +     I  QI+EEL+APP +A
Sbjct: 195 TP-ETHLLKGEDQEHVVISVPSIKSVDDQESQPASSWSK--WIGILRQIMEELLAPPTIA 251

Query: 341 A 343
           A
Sbjct: 252 A 252


>gb|AAM60930.1| unknown [Arabidopsis thaliana]
          Length = 396

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/114 (36%), Positives = 65/114 (57%)
 Frame = +2

Query: 2   VCRVAALSYVSFSMAIGSLYTWTYTYHLIQSANNKYRAKVDDDDDVMIKSIKEPNIIDFD 181
           VCR   LSY SFSMA+G  Y WTYT+ LI+ +  K +A +++ + + IKS       D +
Sbjct: 140 VCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMKVQA-IEESEKIAIKSSNS----DLE 194

Query: 182 ANEIKTLLLNGSLIDVKEDDHTIIHPKSATKRNPIFAIFHQILEELMAPPVLAA 343
           A+  KT LL       ++ ++ ++  ++   R  +    H+ILEEL+APP L A
Sbjct: 195 ADH-KTHLLGAP----EDKENKVVKEETGFWRKGV-DFLHEILEELLAPPTLGA 242


>ref|XP_002884062.1| auxin efflux carrier family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329902|gb|EFH60321.1| auxin efflux carrier
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/114 (35%), Positives = 64/114 (56%)
 Frame = +2

Query: 2   VCRVAALSYVSFSMAIGSLYTWTYTYHLIQSANNKYRAKVDDDDDVMIKSIKEPNIIDFD 181
           VCR   LSY SFSMA+G  Y WTYT+ LI+ +  + +A +++ +   IKS       D +
Sbjct: 140 VCRTVGLSYASFSMALGGFYIWTYTFRLIKGSAMRIQA-IEESERTAIKSSNS----DLE 194

Query: 182 ANEIKTLLLNGSLIDVKEDDHTIIHPKSATKRNPIFAIFHQILEELMAPPVLAA 343
           A+  KT LL       ++ ++ ++  ++   R  +    H+ILEEL+APP L A
Sbjct: 195 ADH-KTHLLGAP----EDKENKVVKEETGFWRK-VVDFLHEILEELLAPPTLGA 242


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