BLASTX nr result

ID: Scutellaria24_contig00023899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023899
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...   147   4e-33
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   140   5e-31
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   139   2e-30
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...   137   8e-30
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   132   1e-28

>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score =  147 bits (372), Expect = 4e-33
 Identities = 89/175 (50%), Positives = 113/175 (64%), Gaps = 9/175 (5%)
 Frame = -3

Query: 803 TKMAYKEKCGSR--GNEEYGIGL--VRSTSFGRKRVFLENRGMGYRN--NDDCIETTPLK 642
           + M     CG      EE G+G   VRS SFGRKR+      +   +  N D    +PLK
Sbjct: 8   SSMRANRVCGGPIVSGEEEGLGFKFVRSYSFGRKRILSTKNNVNSEDLLNLDSTFKSPLK 67

Query: 641 RRCSQGSFFCEEKSALEDLPQEILIRILCGVEHDDLKNLFFVSKAIRDATLVAKKSHFAF 462
           R CS       EKS LE LPQ+ILIR+LC V+HDDLK LF VSK IR+ATL+AK+SHFA+
Sbjct: 68  RLCSLEP----EKSNLESLPQDILIRVLCRVDHDDLKQLFHVSKVIREATLIAKESHFAY 123

Query: 461 STPRKMVGFQ---NVDNLDDSFEIEAPNAPKQSRAPRCRLSVKKLGEISVALFAS 306
           STPRK  GF+   +++N  +  EIEAPNAPKQ R+ + RL+ K + ++SVALFAS
Sbjct: 124 STPRKSQGFRSPFDLENPGELDEIEAPNAPKQRRSYKSRLNRKSIADVSVALFAS 178


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  140 bits (354), Expect = 5e-31
 Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 7/174 (4%)
 Frame = -3

Query: 797 MAYKEKCGSR---GNEEYGIGLVRST-SFGRKRVFLENRGMGYRNNDDCIETTPLKRRCS 630
           MA   + GS+   G+EE G+G V  T S  RKR+ + +      ++   +  TPLKRRC 
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFVPVTRSLSRKRILVSSNTES--SSPSSVLRTPLKRRCG 58

Query: 629 QGSFFCEEKSALEDLPQEILIRILCGVEHDDLKNLFFVSKAIRDATLVAKKSHFAFSTPR 450
           +      EKS LE +PQ+ILIRILCGV+HDDLK LF VS  IRDATL+AKKSHFAFSTP 
Sbjct: 59  EMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPS 118

Query: 449 KMVGFQNVDNLDDSF---EIEAPNAPKQSRAPRCRLSVKKLGEISVALFASGDE 297
           K+  F++  + ++S    +++ P+APKQSR  R RL  ++L  I++ALF+S +E
Sbjct: 119 KVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDEE 172


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  139 bits (350), Expect = 2e-30
 Identities = 83/174 (47%), Positives = 114/174 (65%), Gaps = 7/174 (4%)
 Frame = -3

Query: 797 MAYKEKCGSR---GNEEYGIGLVRST-SFGRKRVFLENRGMGYRNNDDCIETTPLKRRCS 630
           MA   + GS+   G+EE G+G    T S  RKR+ + +      ++   +  TPLKRRC 
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFAPVTRSLSRKRILVSSNTES--SSPSSVLRTPLKRRCG 58

Query: 629 QGSFFCEEKSALEDLPQEILIRILCGVEHDDLKNLFFVSKAIRDATLVAKKSHFAFSTPR 450
           +      EKS LE +PQ+ILIRILCGV+HDDLK LF VS  IRDATL+AKKSHFA+STP 
Sbjct: 59  EMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPS 118

Query: 449 KMVGFQNVDNLDDSF---EIEAPNAPKQSRAPRCRLSVKKLGEISVALFASGDE 297
           K+  F++  + ++S    +++ P+APKQSR  R RL  +KL  I++ALF+S +E
Sbjct: 119 KVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDEE 172


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  137 bits (344), Expect = 8e-30
 Identities = 89/165 (53%), Positives = 107/165 (64%), Gaps = 10/165 (6%)
 Frame = -3

Query: 770 RGNEEYGIGL--VRSTSFGRKRVFLENRGMGYRN--NDDCIETTPLKRRCSQGSFFCEEK 603
           RG EE G+GL  VRS SFGRKRV   N  +   +  N D    + LKR  S       EK
Sbjct: 22  RGEEE-GLGLKFVRSYSFGRKRVLSSNNILNDEDLLNLDSTFISSLKRLRS----LKPEK 76

Query: 602 SALEDLPQEILIRILCGVEHDDLKNLFFVSKAIRDATLVAKKSHFAFSTPRK------MV 441
           S LE LPQ+ILIR+LCGV+HDDLK LF VSK IR+ATL+AK+ HFA+STPRK       +
Sbjct: 77  SNLESLPQDILIRVLCGVDHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRI 136

Query: 440 GFQNVDNLDDSFEIEAPNAPKQSRAPRCRLSVKKLGEISVALFAS 306
            F N   LD   EIEAPNAPKQ R+ +  L+ K + ++SVALFAS
Sbjct: 137 DFGNPSGLD---EIEAPNAPKQRRSYKSLLNRKSIADVSVALFAS 178


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  132 bits (333), Expect = 1e-28
 Identities = 88/185 (47%), Positives = 111/185 (60%), Gaps = 20/185 (10%)
 Frame = -3

Query: 749 IGLVRST-SFGRKRVFLENRGMGYRNNDDCIET---------------TPLKRRCSQGSF 618
           +G VR T SFGRKR+ + N  +     D  I+T               TPLKR CS    
Sbjct: 26  LGCVRYTRSFGRKRIVISN-AVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKRLCSLEP- 83

Query: 617 FCEEKSALEDLPQEILIRILCGVEHDDLKNLFFVSKAIRDATLVAKKSHFAFSTPRKMVG 438
              EKS LE LPQ+IL+R+LC V HDDLK LF VS AIR+ATLVA+K HFA+STPRK+  
Sbjct: 84  ---EKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRKIPA 140

Query: 437 FQ----NVDNLDDSFEIEAPNAPKQSRAPRCRLSVKKLGEISVALFASGDEEGGWPRREM 270
           F+    + +N  +  E EAPNAPK SR  + RL+ K L +ISVALFAS       PR+ +
Sbjct: 141 FRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFAS-------PRKGL 193

Query: 269 LVDME 255
            ++ E
Sbjct: 194 FMETE 198


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