BLASTX nr result

ID: Scutellaria24_contig00023870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023870
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   110   2e-22
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   108   5e-22
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   108   6e-22
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   107   8e-22
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   107   1e-21

>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/63 (74%), Positives = 57/63 (90%)
 Frame = -1

Query: 277 LQIWVWPERLKIMHLLGFTENFTTKISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSG 98
           L++WVWPERL+ MHLLGF   FTTK +LTRVRAVPRYSFS++TL+ LN++RPTIG+MPSG
Sbjct: 202 LKVWVWPERLQTMHLLGFNNEFTTKTNLTRVRAVPRYSFSIDTLEGLNQMRPTIGIMPSG 261

Query: 97  LPW 89
           LPW
Sbjct: 262 LPW 264


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/102 (55%), Positives = 72/102 (70%), Gaps = 5/102 (4%)
 Frame = -1

Query: 325 LLLHKVCVVEKCTFASLQIWVWPERLKIMHLLGFTENFTTKISLTRVRAVPRYSFSLETL 146
           LLLH   V+      +++IWVWPERL+ MHLLGF + FTT  SLTRVRAVPRYSFS++TL
Sbjct: 190 LLLHVSRVL------NIKIWVWPERLRTMHLLGFQDVFTTDTSLTRVRAVPRYSFSIQTL 243

Query: 145 QDLNKLRPTIGVMPSGLPWTE-----DGKIVGSSESSLKKTE 35
           + LN + PTIG+MPSGLPW +     D K+ GS  ++  K E
Sbjct: 244 EGLNTMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNE 285


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/87 (59%), Positives = 66/87 (75%), Gaps = 5/87 (5%)
 Frame = -1

Query: 280 SLQIWVWPERLKIMHLLGFTENFTTKISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPS 101
           +++IWVWPERL+ MHLLGF + FTT  SLTRVRAVPRYSFS++TL+ LN + PTIG+MPS
Sbjct: 199 NIKIWVWPERLRTMHLLGFQDIFTTDTSLTRVRAVPRYSFSIQTLEGLNTMCPTIGIMPS 258

Query: 100 GLPWTE-----DGKIVGSSESSLKKTE 35
           GLPW +     D K+ GS  ++  K E
Sbjct: 259 GLPWVKRPFKGDDKLSGSFLTASMKNE 285


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/64 (73%), Positives = 57/64 (89%)
 Frame = -1

Query: 280 SLQIWVWPERLKIMHLLGFTENFTTKISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPS 101
           +++IWVWPERL+ MHLLGF + FTTK S TRVRAVPRYSFS+ TL++LNK+ PTIG+MPS
Sbjct: 201 NIKIWVWPERLQTMHLLGFHDIFTTKTSQTRVRAVPRYSFSINTLEELNKMHPTIGIMPS 260

Query: 100 GLPW 89
           GLPW
Sbjct: 261 GLPW 264


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/63 (74%), Positives = 56/63 (88%)
 Frame = -1

Query: 277 LQIWVWPERLKIMHLLGFTENFTTKISLTRVRAVPRYSFSLETLQDLNKLRPTIGVMPSG 98
           ++IWVWPERL+ MHLLGF + FTTK SLTR+RAVPRYSFS+ TL+ LN +RPTIG+MPSG
Sbjct: 202 VKIWVWPERLQTMHLLGFHDIFTTKTSLTRIRAVPRYSFSINTLEGLNTVRPTIGIMPSG 261

Query: 97  LPW 89
           LPW
Sbjct: 262 LPW 264


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