BLASTX nr result

ID: Scutellaria24_contig00023832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023832
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325552.1| white-brown-complex ABC transporter family [...    58   9e-07
ref|XP_002327338.1| white-brown-complex ABC transporter family [...    56   3e-06

>ref|XP_002325552.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222862427|gb|EEE99933.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 648

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/94 (40%), Positives = 49/94 (52%)
 Frame = +3

Query: 27  PPPSGGGEDHAPHRNLQPSSPITLKFMDVSYRVKLHGGNAKSRTSSIRSMFXXXXXXAAP 206
           PPP     D  P   L    PITLKFMDV YRVK      K++ S+I+ +F         
Sbjct: 10  PPPPRDSCD-IPSLLLSSCYPITLKFMDVGYRVKFEN---KNKGSNIKRIFGHGP----- 60

Query: 207 PQDVENPVAVAHRHHERTILNGITGSAAPGQVLA 308
                    ++ +  ERTILNGITG A+PG++LA
Sbjct: 61  --------TISDQFQERTILNGITGMASPGEILA 86


>ref|XP_002327338.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222835708|gb|EEE74143.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 652

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 36/99 (36%), Positives = 48/99 (48%)
 Frame = +3

Query: 12  EAAEAPPPSGGGEDHAPHRNLQPSSPITLKFMDVSYRVKLHGGNAKSRTSSIRSMFXXXX 191
           + ++APPP    +   P   L    PITLKFM+V YRVK    N  S    I        
Sbjct: 19  DRSKAPPPRDSRD--LPSLMLSSCYPITLKFMEVGYRVKFENRNKGSNIKRI-------- 68

Query: 192 XXAAPPQDVENPVAVAHRHHERTILNGITGSAAPGQVLA 308
                   + +   +  +  ERTILNGITG A+PG++LA
Sbjct: 69  --------LGHEPTICDQIQERTILNGITGMASPGEILA 99


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