BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023675
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...   444   e-122
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...   443   e-122
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...   439   e-121
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...   439   e-121
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   439   e-121

>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 1194

 Score =  444 bits (1141), Expect = e-122
 Identities = 221/226 (97%), Positives = 225/226 (99%)
 Frame = -2

Query: 678 FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYDGEEVTETQD 499
           FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+DGEEVTETQD
Sbjct: 92  FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQD 151

Query: 498 FTKVFIGKVPIMLRSSYCTLYQNTEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 319
           FTKVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN
Sbjct: 152 FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 211

Query: 318 HVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 139
           HVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR
Sbjct: 212 HVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 271

Query: 138 TEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFV 1
           TEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFV
Sbjct: 272 TEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFV 317


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron
           macrophyllum]
          Length = 1191

 Score =  443 bits (1140), Expect = e-122
 Identities = 221/226 (97%), Positives = 225/226 (99%)
 Frame = -2

Query: 678 FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYDGEEVTETQD 499
           FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+DGEEVTETQD
Sbjct: 89  FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQD 148

Query: 498 FTKVFIGKVPIMLRSSYCTLYQNTEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 319
           FTKVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN
Sbjct: 149 FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 208

Query: 318 HVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 139
           HVYVFKKRQPNKYAYVAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR
Sbjct: 209 HVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 268

Query: 138 TEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFV 1
           TEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFV
Sbjct: 269 TEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFV 314


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
           gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
           Full=DNA-directed RNA polymerase II subunit RPB2;
           Short=RNA polymerase II subunit 2; Short=RNA polymerase
           II subunit B2; AltName: Full=DNA-directed RNA polymerase
           II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
           polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score =  439 bits (1130), Expect = e-121
 Identities = 219/226 (96%), Positives = 224/226 (99%)
 Frame = -2

Query: 678 FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYDGEEVTETQD 499
           FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+DGEEVTETQD
Sbjct: 89  FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQD 148

Query: 498 FTKVFIGKVPIMLRSSYCTLYQNTEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 319
           FTKVFIGKVPIMLRSSYCTLYQN+EKDLTELGECP DQGGYFIINGSEKVLIAQEKMSTN
Sbjct: 149 FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTN 208

Query: 318 HVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 139
           HVYVFKKRQPNKYA+VAEVRSMA+TQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR
Sbjct: 209 HVYVFKKRQPNKYAFVAEVRSMADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 268

Query: 138 TEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFV 1
           TEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFV
Sbjct: 269 TEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFV 314


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score =  439 bits (1129), Expect = e-121
 Identities = 219/226 (96%), Positives = 224/226 (99%)
 Frame = -2

Query: 678 FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYDGEEVTETQD 499
           FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+DGEEVTETQD
Sbjct: 93  FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVTETQD 152

Query: 498 FTKVFIGKVPIMLRSSYCTLYQNTEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 319
           FTKVFIGKVPIMLRSSYCTLYQN+EKDLTELGECP DQGGYFIINGSEKVLIAQEKMSTN
Sbjct: 153 FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTN 212

Query: 318 HVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 139
           HVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR
Sbjct: 213 HVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 272

Query: 138 TEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFV 1
           TEIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFV
Sbjct: 273 TEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFV 318


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
           [Cucumis sativus] gi|449479313|ref|XP_004155566.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB2-like [Cucumis sativus]
          Length = 1199

 Score =  439 bits (1128), Expect = e-121
 Identities = 218/226 (96%), Positives = 224/226 (99%)
 Frame = -2

Query: 678 FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYDGEEVTETQD 499
           FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+DGEEVTETQD
Sbjct: 97  FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQD 156

Query: 498 FTKVFIGKVPIMLRSSYCTLYQNTEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 319
           FTKVFIGKVPIMLRSSYCTLYQN+EKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN
Sbjct: 157 FTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTN 216

Query: 318 HVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 139
           HVYVFKKRQPNKYA+VAEVRSMAE+QNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR
Sbjct: 217 HVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIR 276

Query: 138 TEIPIIIVFRALGFVADKDILEHICYNFQDTQMMELLRPSLEEAFV 1
            EIPIIIVFRALGFVADKDILEHICY+F DTQMMELLRPSLEEAFV
Sbjct: 277 NEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFV 322