BLASTX nr result
ID: Scutellaria24_contig00023559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00023559
(465 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsu... 236 1e-60
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 230 8e-59
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi... 230 8e-59
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ... 226 1e-57
ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2... 224 6e-57
>gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat
protein [Gossypium hirsutum]
Length = 547
Score = 236 bits (603), Expect = 1e-60
Identities = 111/154 (72%), Positives = 130/154 (84%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
PDVV+YGILI+AYCKA+KYD A++L+HEME K K TPH+YCTLINGLGSEKRL+EA++F
Sbjct: 294 PDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEF 353
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
FE K+ G EAPTYN+LVGA+CWS RI DA++V DEMRK + GPN+RTYDIILHHLIK
Sbjct: 354 FERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIK 413
Query: 104 QRRTQEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
RRT EAY FQKM E CEP+VSTYEI+VRMF
Sbjct: 414 ARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMF 447
Score = 65.9 bits (159), Expect = 3e-09
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEA-IK 288
P+ +Y L+ AYC + + D A ++ EM + Y +++ L +R NEA +
Sbjct: 364 PEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFR 423
Query: 287 FFELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLI 108
F ++ GC TY +V FC +R+ A +V+D+M+ + P Y ++ L
Sbjct: 424 FQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLC 483
Query: 107 KQRRTQEAYGMFQKM 63
+ + EA FQ+M
Sbjct: 484 HKNKLGEACKYFQEM 498
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/143 (25%), Positives = 65/143 (45%)
Frame = -2
Query: 440 LINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELCKNSG 261
L++ CK+R + A K++ +M+++R Y L+ G G E L + + K G
Sbjct: 232 LLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDG 291
Query: 260 CLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRTQEAY 81
+ TY L+ A+C +++ A +F EM P Y +++ L ++R EA
Sbjct: 292 FEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEAL 351
Query: 80 GMFQKMDEEVWCEPSVSTYEIMV 12
F++ + P TY +V
Sbjct: 352 EFFERF-KSCGFTPEAPTYNSLV 373
Score = 60.8 bits (146), Expect = 1e-07
Identities = 38/150 (25%), Positives = 74/150 (49%)
Frame = -2
Query: 452 SYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELC 273
SY LI A K +++ L +EM+ +++ + + +++ EAI+ FE
Sbjct: 159 SYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALISRRHARARKVEEAIEAFERM 217
Query: 272 KNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRT 93
+ G +E +N L+ C S ++ A +VFD+M+K P+ ++Y I+L K+
Sbjct: 218 EEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNL 277
Query: 92 QEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
++ +M + + EP V TY I++ +
Sbjct: 278 LRLDEVYLEMKYDGF-EPDVVTYGILISAY 306
>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 230 bits (587), Expect = 8e-59
Identities = 105/154 (68%), Positives = 132/154 (85%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
PDVV++GILINA+CKARKYD A++L+HEME K IK +PH++CTLINGLGSEKRL EA++F
Sbjct: 293 PDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
FE K SG EAPTYNA+VGA+CWS ++ AYR+ DEMRKS +GPN+RTYDIILHHLIK
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 104 QRRTQEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
R+++EAY +FQ+M E CEP++STY+IM+RMF
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMF 446
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
P+ +Y ++ AYC + K +A ++ EM + + Y +++ L ++ EA
Sbjct: 363 PEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSV 422
Query: 284 FE-LCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLI 108
F+ + + GC TY+ ++ FC ER+ A +++DEM+ + P + +++ L
Sbjct: 423 FQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLC 482
Query: 107 KQRRTQEAYGMFQKM 63
+ + ++A FQ+M
Sbjct: 483 HEHKLEDACTYFQEM 497
Score = 62.4 bits (150), Expect = 4e-08
Identities = 34/149 (22%), Positives = 72/149 (48%)
Frame = -2
Query: 458 VVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFE 279
V + L++ CK+R A +++ +M+ R K Y L+ G G ++ L + + +
Sbjct: 225 VSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYR 284
Query: 278 LCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQR 99
++ G + T+ L+ A C + + +A R+F EM + P+ + +++ L ++
Sbjct: 285 EMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEK 344
Query: 98 RTQEAYGMFQKMDEEVWCEPSVSTYEIMV 12
R +EA F+++ + P TY +V
Sbjct: 345 RLKEALEFFEQLKLSGFA-PEAPTYNAVV 372
Score = 60.1 bits (144), Expect = 2e-07
Identities = 36/147 (24%), Positives = 75/147 (51%)
Frame = -2
Query: 452 SYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELC 273
SY +LI A K ++++ L +M+RK I + + + +++ EA++ FE
Sbjct: 158 SYNLLIEALGKIKQFNVIWNLVSDMKRKGILSR-ETFALITRRYARARKVKEAVESFEKM 216
Query: 272 KNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRT 93
+ G + +N L+ C S ++ A VFD+M+ P+ ++Y I+L + +
Sbjct: 217 EKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNL 276
Query: 92 QEAYGMFQKMDEEVWCEPSVSTYEIMV 12
+ ++++M +E + EP V T+ I++
Sbjct: 277 LKLNEVYREMRDEGF-EPDVVTFGILI 302
>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 230 bits (587), Expect = 8e-59
Identities = 105/154 (68%), Positives = 132/154 (85%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
PDVV++GILINA+CKARKYD A++L+HEME K IK +PH++CTLINGLGSEKRL EA++F
Sbjct: 293 PDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEF 352
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
FE K SG EAPTYNA+VGA+CWS ++ AYR+ DEMRKS +GPN+RTYDIILHHLIK
Sbjct: 353 FEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIK 412
Query: 104 QRRTQEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
R+++EAY +FQ+M E CEP++STY+IM+RMF
Sbjct: 413 GRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMF 446
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/135 (23%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
P+ +Y ++ AYC + K +A ++ EM + + Y +++ L ++ EA
Sbjct: 363 PEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSV 422
Query: 284 FE-LCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLI 108
F+ + + GC TY+ ++ FC ER+ A +++DEM+ + P + +++ L
Sbjct: 423 FQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLC 482
Query: 107 KQRRTQEAYGMFQKM 63
+ + ++A FQ+M
Sbjct: 483 HEHKLEDACTYFQEM 497
Score = 62.4 bits (150), Expect = 4e-08
Identities = 34/149 (22%), Positives = 72/149 (48%)
Frame = -2
Query: 458 VVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFE 279
V + L++ CK+R A +++ +M+ R K Y L+ G G ++ L + + +
Sbjct: 225 VSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYR 284
Query: 278 LCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQR 99
++ G + T+ L+ A C + + +A R+F EM + P+ + +++ L ++
Sbjct: 285 EMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEK 344
Query: 98 RTQEAYGMFQKMDEEVWCEPSVSTYEIMV 12
R +EA F+++ + P TY +V
Sbjct: 345 RLKEALEFFEQLKLSGFA-PEAPTYNAVV 372
Score = 60.1 bits (144), Expect = 2e-07
Identities = 36/147 (24%), Positives = 75/147 (51%)
Frame = -2
Query: 452 SYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELC 273
SY +LI A K ++++ L +M+RK I + + + +++ EA++ FE
Sbjct: 158 SYNLLIEALGKIKQFNVIWNLVSDMKRKGILSR-ETFALITRRYARARKVKEAVESFEKM 216
Query: 272 KNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRT 93
+ G + +N L+ C S ++ A VFD+M+ P+ ++Y I+L + +
Sbjct: 217 EKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNL 276
Query: 92 QEAYGMFQKMDEEVWCEPSVSTYEIMV 12
+ ++++M +E + EP V T+ I++
Sbjct: 277 LKLNEVYREMRDEGF-EPDVVTFGILI 302
>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334660|gb|EFH65078.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 512
Score = 226 bits (577), Expect = 1e-57
Identities = 103/154 (66%), Positives = 133/154 (86%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
PDVV+YGI+INAYCKA+KYD AV+ ++EME++ K +PHI+C+LINGLGSEK+LN+A++F
Sbjct: 267 PDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 326
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
FE K+SG +EAPTYNALVGA+CWS+R++DA++ DEMR +GPNARTYDIILHHLI+
Sbjct: 327 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIR 386
Query: 104 QRRTQEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
+RT+EAY ++QKM CEP+VSTYEIMVRMF
Sbjct: 387 MQRTKEAYEVYQKMS----CEPTVSTYEIMVRMF 416
>ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 224 bits (571), Expect = 6e-57
Identities = 106/154 (68%), Positives = 130/154 (84%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
PDVV+YGILINA+CK+R+YD A++L+HEME K K +PHIYCTLINGLG+EKRL+EA++F
Sbjct: 176 PDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEF 235
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
FEL K SG + EAPTYNA+VGA+CWSER+ D R DEMRK +GP+ARTYDIILHHLI+
Sbjct: 236 FELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIR 295
Query: 104 QRRTQEAYGMFQKMDEEVWCEPSVSTYEIMVRMF 3
+T+ AY +FQKM E C+PSVSTYEI+VRMF
Sbjct: 296 AGKTKIAYSVFQKMSCE-GCQPSVSTYEIIVRMF 328
Score = 68.9 bits (167), Expect = 4e-10
Identities = 39/143 (27%), Positives = 68/143 (47%)
Frame = -2
Query: 440 LINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELCKNSG 261
L++ CK+R+ + A ++ +M ++ A Y L+ G G EK L+ ++ + K+ G
Sbjct: 114 LLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEG 173
Query: 260 CLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRTQEAY 81
+ TY L+ A C S R DA +F EM P+ Y +++ L ++R EA
Sbjct: 174 FEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEAL 233
Query: 80 GMFQKMDEEVWCEPSVSTYEIMV 12
F+ + + P TY +V
Sbjct: 234 EFFE-LSKASGFVPEAPTYNAVV 255
Score = 60.1 bits (144), Expect = 2e-07
Identities = 31/134 (23%), Positives = 61/134 (45%)
Frame = -2
Query: 464 PDVVSYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKF 285
P+ +Y ++ AYC + + D + EM + + + Y +++ L + A
Sbjct: 246 PEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSV 305
Query: 284 FELCKNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIK 105
F+ GC TY +V FC +R+ A +V+D+M+ + P + +++ L
Sbjct: 306 FQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCH 365
Query: 104 QRRTQEAYGMFQKM 63
+ + EA FQ+M
Sbjct: 366 ESKLDEACMYFQEM 379
Score = 55.8 bits (133), Expect = 3e-06
Identities = 33/143 (23%), Positives = 68/143 (47%)
Frame = -2
Query: 452 SYGILINAYCKARKYDHAVKLYHEMERKRIKATPHIYCTLINGLGSEKRLNEAIKFFELC 273
++ ++ Y +ARK AV + +ME+ +K L++ L +++ A F+
Sbjct: 75 TFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKM 134
Query: 272 KNSGCLVEAPTYNALVGAFCWSERIQDAYRVFDEMRKSTLGPNARTYDIILHHLIKQRRT 93
G + + +Y L+ + + + V++EM+ P+ TY I+++ K RR
Sbjct: 135 NKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRY 194
Query: 92 QEAYGMFQKMDEEVWCEPSVSTY 24
+A +F +M+ + C+PS Y
Sbjct: 195 DDAIELFHEMEAKN-CKPSPHIY 216