BLASTX nr result

ID: Scutellaria24_contig00023536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023536
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi...   218   9e-55
ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|2...   212   8e-53
gb|AFP73237.1| CST complex subunit STN1-like protein [Carica pap...   201   1e-49
ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatul...   192   9e-47
ref|XP_002524745.1| conserved hypothetical protein [Ricinus comm...   191   1e-46

>ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera]
           gi|147810449|emb|CAN65336.1| hypothetical protein
           VITISV_023849 [Vitis vinifera]
          Length = 165

 Score =  218 bits (556), Expect = 9e-55
 Identities = 102/155 (65%), Positives = 128/155 (82%), Gaps = 4/155 (2%)
 Frame = +2

Query: 116 LYNTHVKLLAFDFLTL----SPNPTDTSSFSRKGVPLSRAESVGVVVTRDLKPGKFLKFT 283
           LYNTHVKLLAFD L+L    SP+ +D  SFSR+G PLSRAE++G V +R+LKP KFLKFT
Sbjct: 5   LYNTHVKLLAFDLLSLTQTPSPSSSDPISFSRRGTPLSRAETLGTVTSRELKPHKFLKFT 64

Query: 284 IDDGTGCITCVLWLNQLTSAYFSKRSPSSVRSIAQMAAKTASRIQLGVVARVRGRITGYR 463
           +DDGTGC+ CVLWLN L+S YFS+R+P+ VR IA +A   AS ++LGV+ RVRGRIT YR
Sbjct: 65  VDDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRITAYR 124

Query: 464 GMLQITVSDVVLERDPNAQVLHWLECVNLARKCYD 568
           G +QITVS+V++ERDPN ++LHWL+C+ LARKCYD
Sbjct: 125 GTVQITVSNVIVERDPNMEILHWLDCIKLARKCYD 159


>ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|222857050|gb|EEE94597.1|
           predicted protein [Populus trichocarpa]
          Length = 166

 Score =  212 bits (539), Expect = 8e-53
 Identities = 99/157 (63%), Positives = 126/157 (80%), Gaps = 4/157 (2%)
 Frame = +2

Query: 110 EALYNTHVKLLAFDFLTLSPNPT----DTSSFSRKGVPLSRAESVGVVVTRDLKPGKFLK 277
           + L NTHVKLLAFD L+L+  P+    D  +F+RK   +SR E +GV+ +R+LKP KFLK
Sbjct: 3   QRLQNTHVKLLAFDLLSLAQTPSFSTYDPITFTRKNTTISRTEILGVITSRELKPNKFLK 62

Query: 278 FTIDDGTGCITCVLWLNQLTSAYFSKRSPSSVRSIAQMAAKTASRIQLGVVARVRGRITG 457
           FTIDDGTGC+TCVLWLNQLTS YFS+R+P++V+ IA MAA  AS I++G+VARVRGRI G
Sbjct: 63  FTIDDGTGCVTCVLWLNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRIAG 122

Query: 458 YRGMLQITVSDVVLERDPNAQVLHWLECVNLARKCYD 568
           YRG +Q+TVSDVV+ERDPN +  HWL+C+ LAR CY+
Sbjct: 123 YRGAVQVTVSDVVVERDPNVEAFHWLDCIRLARNCYN 159


>gb|AFP73237.1| CST complex subunit STN1-like protein [Carica papaya]
          Length = 154

 Score =  201 bits (511), Expect = 1e-49
 Identities = 98/165 (59%), Positives = 128/165 (77%)
 Frame = +2

Query: 86  LFPANLDMEALYNTHVKLLAFDFLTLSPNPTDTSSFSRKGVPLSRAESVGVVVTRDLKPG 265
           +FP+ ++       H+KLLAFDF +L+   + + SF+RKG+P+SR ES+G VV+RDLKP 
Sbjct: 1   MFPSKME------PHMKLLAFDFTSLTQTRSHSKSFTRKGIPISRVESLGTVVSRDLKPS 54

Query: 266 KFLKFTIDDGTGCITCVLWLNQLTSAYFSKRSPSSVRSIAQMAAKTASRIQLGVVARVRG 445
           +FLKF +DDGTGCI C+LWLNQL+    S ++PS+VR IAQ+A   A  I++G VARVRG
Sbjct: 55  RFLKFKLDDGTGCIACILWLNQLS----SNQNPSTVRLIAQVANHLAEEIKMGRVARVRG 110

Query: 446 RITGYRGMLQITVSDVVLERDPNAQVLHWLECVNLARKCYDRFCK 580
           R+TGYRG +QITVSD+V+ERDPNAQ+LHWLEC+ LARK  D  CK
Sbjct: 111 RVTGYRGRIQITVSDIVIERDPNAQILHWLECIRLARKVLDS-CK 154


>ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula]
           gi|355513354|gb|AES94977.1| CST complex subunit STN1
           [Medicago truncatula]
          Length = 185

 Score =  192 bits (487), Expect = 9e-47
 Identities = 89/153 (58%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
 Frame = +2

Query: 113 ALYNTHVKLLAFDFLTLSPNPTDTSSFSRKGVPLSRAESVGVVVTRDLKPGKFLKFTIDD 292
           +L+NTHVKLLAFD LTL+P  +   SF+R  +P++RAE+VG +  RD KP KFL+F IDD
Sbjct: 11  SLHNTHVKLLAFDLLTLTPPISPNHSFTRNSIPITRAETVGTITLRDHKPFKFLRFAIDD 70

Query: 293 GTGCITCVLWLNQLTSAYFS-KRSPSSVRSIAQMAAKTASRIQLGVVARVRGRITGYRGM 469
           GTGCI C+LWLN +TS + + +RSP  +  +A  AA++A  +++G VARVRGR+T Y+G 
Sbjct: 71  GTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYKGG 130

Query: 470 LQITVSDVVLERDPNAQVLHWLECVNLARKCYD 568
           +QITV+DV+ ERDPN +VLHW+ECVNLAR CY+
Sbjct: 131 VQITVTDVISERDPNVEVLHWVECVNLARNCYN 163


>ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis]
           gi|223535929|gb|EEF37588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score =  191 bits (485), Expect = 1e-46
 Identities = 94/152 (61%), Positives = 115/152 (75%), Gaps = 4/152 (2%)
 Frame = +2

Query: 122 NTHVKLLAFDFLTLSP----NPTDTSSFSRKGVPLSRAESVGVVVTRDLKPGKFLKFTID 289
           N HVKLLA D ++L+     +P+D  SFS      SRAE +G+V + + KP KFLKFTID
Sbjct: 7   NIHVKLLALDLVSLTQTPPFSPSDPISFSHANKSFSRAEILGIVTSCEHKPHKFLKFTID 66

Query: 290 DGTGCITCVLWLNQLTSAYFSKRSPSSVRSIAQMAAKTASRIQLGVVARVRGRITGYRGM 469
           DGTGC++C+LWLNQLTS YFS+RS  +VR IA  A   AS I++GVVARVRGRIT YRG 
Sbjct: 67  DGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFASLIKIGVVARVRGRITSYRGT 126

Query: 470 LQITVSDVVLERDPNAQVLHWLECVNLARKCY 565
           +QIT SDVV+ERDPNA++ HWL+CV LAR CY
Sbjct: 127 VQITASDVVIERDPNAEIFHWLQCVKLARSCY 158


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