BLASTX nr result

ID: Scutellaria24_contig00023520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023520
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g...    95   5e-18
ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g...    79   5e-13
ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g...    79   5e-13
ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g...    75   5e-12
ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatul...    71   1e-10

>ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 648

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 58/124 (46%), Positives = 79/124 (63%), Gaps = 4/124 (3%)
 Frame = -1

Query: 364 GKGGKVVEKIRRETGCRIKVLAMDMFCSASSIREEIVEIEGHGLAVKSALVAVTGRLQEF 185
           GKGGKVVEKIRRE+G +IKVL  +   + ++  +E+VEIEG  LAVK ALVAV+ RLQ+ 
Sbjct: 167 GKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDC 226

Query: 184 PLAEQTKTYWTRFLE---SESLPLQTIDLPLQRSPIQQSTPSNSTCHAWGGGP-SFESEK 17
           P  ++TK    R LE    +SLP   +DL  QR  +    PSN+  +A G  P S  +E+
Sbjct: 227 PNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTER 286

Query: 16  VSDM 5
           +S +
Sbjct: 287 ISTL 290


>ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 643

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/107 (43%), Positives = 67/107 (62%)
 Frame = -1

Query: 364 GKGGKVVEKIRRETGCRIKVLAMDMFCSASSIREEIVEIEGHGLAVKSALVAVTGRLQEF 185
           GKGGKVVEKIR+E+GCRI+VL  D   + +   +E++EIEG   A+K AL+AV+ RLQ+ 
Sbjct: 181 GKGGKVVEKIRKESGCRIRVLT-DKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDC 239

Query: 184 PLAEQTKTYWTRFLESESLPLQTIDLPLQRSPIQQSTPSNSTCHAWG 44
           P +E+        +  E+LP   +D  LQR+ +    PS+S   A G
Sbjct: 240 PPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASG 286


>ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 658

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/107 (43%), Positives = 67/107 (62%)
 Frame = -1

Query: 364 GKGGKVVEKIRRETGCRIKVLAMDMFCSASSIREEIVEIEGHGLAVKSALVAVTGRLQEF 185
           GKGGKVVEKIR+E+GCRI+VL  D   + +   +E++EIEG   A+K AL+AV+ RLQ+ 
Sbjct: 176 GKGGKVVEKIRKESGCRIRVLT-DKLPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQDC 234

Query: 184 PLAEQTKTYWTRFLESESLPLQTIDLPLQRSPIQQSTPSNSTCHAWG 44
           P +E+        +  E+LP   +D  LQR+ +    PS+S   A G
Sbjct: 235 PPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASG 281


>ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 591

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 11/126 (8%)
 Frame = -1

Query: 364 GKGGKVVEKIRRETGCRIKVLAMDM-FCSASSIREEIVEIEGHGLAVKSALVAVTGRLQE 188
           GK GKVVEKIR +TGC+I+VL   +  C+A S  +EIVE+EG   +VK ALVAV+G LQ+
Sbjct: 132 GKAGKVVEKIRMDTGCKIRVLNEGLPACTAPS--DEIVEVEGQLTSVKKALVAVSGCLQD 189

Query: 187 FPLAEQTKTYWTRFLE---SE--SLPLQT-----IDLPLQRSPIQQSTPSNSTCHAWGGG 38
            P  ++TK   +R  E   SE  S+PL++     ID  LQRS    ST SN +     G 
Sbjct: 190 CPPPDRTKMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSS-TLSTLSNRSNGNASGA 248

Query: 37  PSFESE 20
           P   +E
Sbjct: 249 PKLSAE 254


>ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355509450|gb|AES90592.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 616

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
 Frame = -1

Query: 364 GKGGKVVEKIRRETGCRIKVLAMDMFCSASSIREEIVEIEGHGLAVKSALVAVTGRLQEF 185
           GKGG VV KIR +TGCRI+VL  D   + +   +EI+EI+G   +VK ALVAV GRLQ+ 
Sbjct: 128 GKGGMVVAKIRADTGCRIRVLN-DKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDC 186

Query: 184 PLAEQTKTYWTRFLES----------ESLPLQTIDLPLQRS 92
           P  ++TK   TR  E+          E L    +D  LQRS
Sbjct: 187 PPLDRTKMMGTRPYEAFQNETSAVPHEGLTDLNMDFRLQRS 227


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