BLASTX nr result

ID: Scutellaria24_contig00023376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023376
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 ...   176   2e-42
ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group] g...   167   1e-39
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...   166   2e-39
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   159   2e-37
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   159   2e-37

>ref|XP_003557978.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Brachypodium
            distachyon]
          Length = 1178

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/123 (69%), Positives = 102/123 (82%)
 Frame = -1

Query: 371  LKKLALRAKFDSQFNGSEVPDEDDDDNNGIKISHGQSSGSGYFDKLKEEIELRKQMNVAE 192
            LKKLAL+AKFDS+++GSE+  E  D++   K    QS G GYFDKLKEEIELRKQMN++E
Sbjct: 707  LKKLALKAKFDSEYDGSELSGEQVDEDRK-KSKRDQSDGGGYFDKLKEEIELRKQMNISE 765

Query: 191  LNELDDVTRVEIEGYRTGTYVRIEVRDVPCEMVENFDPCHPILVGGLALGEENIGYMQVR 12
            LN+LD+ TRVEIEG+RTGTYVR+EV  VP E+VE+FDPCHPILVGG+ LGEEN GYMQV 
Sbjct: 766  LNDLDEDTRVEIEGFRTGTYVRLEVHGVPFELVEHFDPCHPILVGGIGLGEENTGYMQVS 825

Query: 11   FKR 3
             KR
Sbjct: 826  LKR 828


>ref|NP_001050021.1| Os03g0333100 [Oryza sativa Japonica Group]
            gi|113548492|dbj|BAF11935.1| Os03g0333100 [Oryza sativa
            Japonica Group]
          Length = 1180

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/123 (64%), Positives = 102/123 (82%)
 Frame = -1

Query: 371  LKKLALRAKFDSQFNGSEVPDEDDDDNNGIKISHGQSSGSGYFDKLKEEIELRKQMNVAE 192
            LKKLAL+AKFD++++GS++  E+ D N+  K    +++G GYFDKLKEEIE+RKQMN++E
Sbjct: 707  LKKLALKAKFDAEYDGSDLSGEEVD-NDTKKSKREETNGGGYFDKLKEEIEIRKQMNISE 765

Query: 191  LNELDDVTRVEIEGYRTGTYVRIEVRDVPCEMVENFDPCHPILVGGLALGEENIGYMQVR 12
            LN+LD+ TRVEIEG+RTG+Y+R+EV  VP E+VE FDPCHPILVGG+ LGEEN GYMQ  
Sbjct: 766  LNDLDEDTRVEIEGFRTGSYIRLEVHGVPFELVEYFDPCHPILVGGIGLGEENTGYMQAS 825

Query: 11   FKR 3
             KR
Sbjct: 826  LKR 828


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
            gi|241921770|gb|EER94914.1| hypothetical protein
            SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/125 (66%), Positives = 103/125 (82%), Gaps = 2/125 (1%)
 Frame = -1

Query: 371  LKKLALRAKFDSQ--FNGSEVPDEDDDDNNGIKISHGQSSGSGYFDKLKEEIELRKQMNV 198
            LKKLALRAKFD+Q  ++GSE+ D++ DD    K    QS+G GYFDKLKEE+ELRKQMN+
Sbjct: 709  LKKLALRAKFDAQLTYDGSELSDDEVDDVKK-KSRQEQSNGGGYFDKLKEEMELRKQMNM 767

Query: 197  AELNELDDVTRVEIEGYRTGTYVRIEVRDVPCEMVENFDPCHPILVGGLALGEENIGYMQ 18
            +ELN+LD+ TRV+IEG+RTGTYVR+EV  VP E+VE+F+PCHPILVGG+ LGEEN G+MQ
Sbjct: 768  SELNDLDEETRVDIEGFRTGTYVRLEVHGVPFELVEHFNPCHPILVGGIGLGEENTGFMQ 827

Query: 17   VRFKR 3
               KR
Sbjct: 828  ASLKR 832


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/123 (65%), Positives = 95/123 (77%)
 Frame = -1

Query: 371  LKKLALRAKFDSQFNGSEVPDEDDDDNNGIKISHGQSSGSGYFDKLKEEIELRKQMNVAE 192
            LKKLAL AKF S++   E    D  + N  K    Q + S Y DKLKEEIELRKQMN+AE
Sbjct: 701  LKKLALHAKFVSRYPFLE----DTGNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAE 756

Query: 191  LNELDDVTRVEIEGYRTGTYVRIEVRDVPCEMVENFDPCHPILVGGLALGEENIGYMQVR 12
            LN+LD+ TR+E+EG+RTGTY+R+EV DVPCEMVE+FDP HPILVGG+ LGEEN+GYMQ R
Sbjct: 757  LNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQAR 816

Query: 11   FKR 3
             KR
Sbjct: 817  LKR 819


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/123 (65%), Positives = 95/123 (77%)
 Frame = -1

Query: 371  LKKLALRAKFDSQFNGSEVPDEDDDDNNGIKISHGQSSGSGYFDKLKEEIELRKQMNVAE 192
            LKKLAL AKF S++   E    D  + N  K    Q + S Y DKLKEEIELRKQMN+AE
Sbjct: 701  LKKLALHAKFVSRYPFLE----DTGNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAE 756

Query: 191  LNELDDVTRVEIEGYRTGTYVRIEVRDVPCEMVENFDPCHPILVGGLALGEENIGYMQVR 12
            LN+LD+ TR+E+EG+RTGTY+R+EV DVPCEMVE+FDP HPILVGG+ LGEEN+GYMQ R
Sbjct: 757  LNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQAR 816

Query: 11   FKR 3
             KR
Sbjct: 817  LKR 819


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