BLASTX nr result

ID: Scutellaria24_contig00023360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023360
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37461.1| unknown [Lotus japonicus]                              189   2e-46
emb|CBI28495.3| unnamed protein product [Vitis vinifera]              188   5e-46
ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein lig...   188   5e-46
ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-44
ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein lig...   180   9e-44

>gb|AFK37461.1| unknown [Lotus japonicus]
          Length = 433

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/129 (68%), Positives = 104/129 (80%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           +RWMS   TVMSFGDG+ GALGL  S +G+G DAYEPTP+P LP D+ SV AGHYHSLAV
Sbjct: 21  QRWMS---TVMSFGDGTHGALGLPSSAVGVGLDAYEPTPIPSLPSDIVSVHAGHYHSLAV 77

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDRVGVLAAFASGVVSAAIGEGGF 481
           TSQGH+WAWGRN+EAQLG   +S RE WN P+ V GL+ V V AA+ASGVVSAA+G+ G 
Sbjct: 78  TSQGHLWAWGRNNEAQLGPGFSSSRESWNEPKMVVGLENVKVCAAYASGVVSAAVGDDGS 137

Query: 482 LWVWGKSKR 508
           +WVWGKSKR
Sbjct: 138 VWVWGKSKR 146


>emb|CBI28495.3| unnamed protein product [Vitis vinifera]
          Length = 426

 Score =  188 bits (477), Expect = 5e-46
 Identities = 91/128 (71%), Positives = 102/128 (79%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           R + S   +VMSFGDGS GALGL  S IGLG DAYEPTPVPGLP DVCSV+AGHYHSLAV
Sbjct: 8   RCFSSSARSVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAV 67

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDRVGVLAAFASGVVSAAIGEGGF 481
           T+QG VWAWGRN E QLGR   +PR+ WN P +V GL++V V AAFASGV+S AIG+ G 
Sbjct: 68  TAQGEVWAWGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGS 127

Query: 482 LWVWGKSK 505
           LWVWGKSK
Sbjct: 128 LWVWGKSK 135


>ref|XP_002266143.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 432

 Score =  188 bits (477), Expect = 5e-46
 Identities = 91/128 (71%), Positives = 102/128 (79%)
 Frame = +2

Query: 122 RRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAV 301
           R + S   +VMSFGDGS GALGL  S IGLG DAYEPTPVPGLP DVCSV+AGHYHSLAV
Sbjct: 14  RCFSSSARSVMSFGDGSHGALGLPSSLIGLGGDAYEPTPVPGLPSDVCSVSAGHYHSLAV 73

Query: 302 TSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAGLDRVGVLAAFASGVVSAAIGEGGF 481
           T+QG VWAWGRN E QLGR   +PR+ WN P +V GL++V V AAFASGV+S AIG+ G 
Sbjct: 74  TAQGEVWAWGRNHEGQLGRGLLAPRDSWNVPTRVEGLNQVKVRAAFASGVISTAIGDDGS 133

Query: 482 LWVWGKSK 505
           LWVWGKSK
Sbjct: 134 LWVWGKSK 141


>ref|XP_002320544.1| predicted protein [Populus trichocarpa] gi|222861317|gb|EEE98859.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/119 (73%), Positives = 96/119 (80%)
 Frame = +2

Query: 152 MSFGDGSQGALGLACSPIGLGSDAYEPTPVPGLPPDVCSVAAGHYHSLAVTSQGHVWAWG 331
           MSFGDGS GALGL  S IG G DAYEPTPV GLP D+ SV+AGHYHSLAVTS G +WAWG
Sbjct: 1   MSFGDGSHGALGLPTSLIGHGMDAYEPTPVTGLPSDITSVSAGHYHSLAVTSHGQLWAWG 60

Query: 332 RNSEAQLGRDHASPREMWNNPQKVAGLDRVGVLAAFASGVVSAAIGEGGFLWVWGKSKR 508
           RN E QLGR   SPR+ WN P++V GLD+V V AAFASGVVSAAIG+ G LWVWGKSKR
Sbjct: 61  RNHEVQLGRGLLSPRDTWNEPKRVEGLDQVQVTAAFASGVVSAAIGDDGSLWVWGKSKR 119


>ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 432

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/151 (60%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = +2

Query: 59  IMLRSLSKKKISQSGLLIGLSRRWMSVKGTVMSFGDGSQGALGLACSPIGLGSDAYEPTP 238
           +++R L  K +S      G+  RWMS   TVM FGDGSQGA+G   SP+G+G DAYEPTP
Sbjct: 1   MLVRKLKLKAVS------GVHLRWMS---TVMCFGDGSQGAVG---SPVGVGLDAYEPTP 48

Query: 239 VPGLPPDVCSVAAGHYHSLAVTSQGHVWAWGRNSEAQLGRDHASPREMWNNPQKVAG-LD 415
           V  LP D+ SV AGHYHSLA+TS GH+WAWGRN+EAQLGR  +S RE W+ P++V G L+
Sbjct: 49  VTALPSDIVSVHAGHYHSLALTSHGHLWAWGRNNEAQLGRGPSSSRESWHEPERVKGLLE 108

Query: 416 RVGVLAAFASGVVSAAIGEGGFLWVWGKSKR 508
            V V  AFASGVVSAA+G+ G +WVWGKSKR
Sbjct: 109 NVNVCGAFASGVVSAALGDDGSVWVWGKSKR 139


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