BLASTX nr result

ID: Scutellaria24_contig00023311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023311
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...    88   4e-15
ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containi...    87   6e-15
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    87   8e-15
ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14

>ref|XP_002326124.1| predicted protein [Populus trichocarpa] gi|222833317|gb|EEE71794.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 47/85 (55%), Positives = 61/85 (71%)
 Frame = +2

Query: 2   TILILGHCMKGRMFEAIGLYEKMLSVGCAPDNITIRCLISCLRKAGMAHEANEIEQNALN 181
           TILI+GHC+KGRMFEAI ++ +ML+  CAPDNIT+  LISCL KAGM +EA  I + AL 
Sbjct: 428 TILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487

Query: 182 GLHAGSSSSESTISVRNNINVIMAV 256
             + G SS E  I +R N ++ +AV
Sbjct: 488 DRNLGLSSFEKAIPLRTNTDIPVAV 512


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 43/84 (51%), Positives = 57/84 (67%)
 Frame = +2

Query: 2   TILILGHCMKGRMFEAIGLYEKMLSVGCAPDNITIRCLISCLRKAGMAHEANEIEQNALN 181
           TILI+GHCMKGRM EA+ +++KML++GCAPDNITI  L++CL KAG   EA  I Q A  
Sbjct: 448 TILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASE 507

Query: 182 GLHAGSSSSESTISVRNNINVIMA 253
            L+   SS   T  +R   ++ +A
Sbjct: 508 DLNLSFSSLRKTFPMRVKTDISVA 531


>ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 43/85 (50%), Positives = 59/85 (69%)
 Frame = +2

Query: 2   TILILGHCMKGRMFEAIGLYEKMLSVGCAPDNITIRCLISCLRKAGMAHEANEIEQNALN 181
           TILI+GHCMKGRM EAIG ++KML+VGCAPD IT+  L SCL KAGM  EA  +++    
Sbjct: 427 TILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQ 486

Query: 182 GLHAGSSSSESTISVRNNINVIMAV 256
            L  G++SS+ +      +++ +AV
Sbjct: 487 NLTLGTTSSKKSYHETTYVSIPVAV 511


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 42/84 (50%), Positives = 57/84 (67%)
 Frame = +2

Query: 2   TILILGHCMKGRMFEAIGLYEKMLSVGCAPDNITIRCLISCLRKAGMAHEANEIEQNALN 181
           TILI+GHCMKGR+ EAI ++ +ML  GCAPD+IT+  LISCL KAGM +EA  I Q A  
Sbjct: 487 TILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASE 546

Query: 182 GLHAGSSSSESTISVRNNINVIMA 253
             + G  S +  + +R N ++ +A
Sbjct: 547 DFNLGLKSLKRNVPLRTNTDIPVA 570


>ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 44/85 (51%), Positives = 58/85 (68%)
 Frame = +2

Query: 2   TILILGHCMKGRMFEAIGLYEKMLSVGCAPDNITIRCLISCLRKAGMAHEANEIEQNALN 181
           TILI+GHCMKGRM EAIG++ KML+VGCAPD IT+  L SCL KAGM  EA  +++    
Sbjct: 426 TILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQ 485

Query: 182 GLHAGSSSSESTISVRNNINVIMAV 256
            L  G +SS+ +     N ++ +AV
Sbjct: 486 NLTLGITSSKKSYHETTNESIPVAV 510


Top