BLASTX nr result

ID: Scutellaria24_contig00023267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023267
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   210   8e-53
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   209   2e-52
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   209   2e-52
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   209   2e-52
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   209   2e-52

>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score =  210 bits (535), Expect = 8e-53
 Identities = 108/161 (67%), Positives = 117/161 (72%)
 Frame = -2

Query: 484 SPERWEAKQLIASGVMSVKEYPMFDEEGDGMXXXXXXXXXXXXXXXXXXXXXXLQGQSRY 305
           SPERWEAKQLIASGV+ V+EYPM+D+EGDG+                      LQGQ+RY
Sbjct: 356 SPERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEELEIELNEDEPAFLQGQTRY 415

Query: 304 SIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPE 125
           S+DMSPVKIFKNPEG           LIK          RTMLDSIPKDLNRPWEDPMPE
Sbjct: 416 SVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE 475

Query: 124 TGERHLAQELRGVGLSAYDLPEWKKDAYGKALTFGQRSKLS 2
           TGERHLAQELRGVGLSAYD+PEWKKDA+GKALTFGQRSKLS
Sbjct: 476 TGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 516


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  209 bits (532), Expect = 2e-52
 Identities = 107/161 (66%), Positives = 117/161 (72%)
 Frame = -2

Query: 484 SPERWEAKQLIASGVMSVKEYPMFDEEGDGMXXXXXXXXXXXXXXXXXXXXXXLQGQSRY 305
           SPE+WEAKQLIASGV+ ++E+PM+D+EGDGM                      LQGQSRY
Sbjct: 351 SPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRY 410

Query: 304 SIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPE 125
           S+DMSPVKIFKNPEG           LIK          RTMLDSIPKDLNRPWEDPMPE
Sbjct: 411 SMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE 470

Query: 124 TGERHLAQELRGVGLSAYDLPEWKKDAYGKALTFGQRSKLS 2
           TGERHLAQELRGVGLSAYD+PEWKKDA+GKALTFGQRSKLS
Sbjct: 471 TGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 511


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  209 bits (532), Expect = 2e-52
 Identities = 107/161 (66%), Positives = 117/161 (72%)
 Frame = -2

Query: 484 SPERWEAKQLIASGVMSVKEYPMFDEEGDGMXXXXXXXXXXXXXXXXXXXXXXLQGQSRY 305
           SPE+WEAKQLIASGV+ ++E+PM+D+EGDGM                      LQGQSRY
Sbjct: 354 SPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRY 413

Query: 304 SIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPE 125
           S+DMSPVKIFKNPEG           LIK          RTMLDSIPKDLNRPWEDPMPE
Sbjct: 414 SMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE 473

Query: 124 TGERHLAQELRGVGLSAYDLPEWKKDAYGKALTFGQRSKLS 2
           TGERHLAQELRGVGLSAYD+PEWKKDA+GKALTFGQRSKLS
Sbjct: 474 TGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 514


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  209 bits (532), Expect = 2e-52
 Identities = 107/161 (66%), Positives = 117/161 (72%)
 Frame = -2

Query: 484 SPERWEAKQLIASGVMSVKEYPMFDEEGDGMXXXXXXXXXXXXXXXXXXXXXXLQGQSRY 305
           SPE+WEAKQLIASGV+ ++E+PM+D+EGDGM                      LQGQSRY
Sbjct: 363 SPEKWEAKQLIASGVLDIREFPMYDDEGDGMLYQEEGAEEELEIEMNEDEPAFLQGQSRY 422

Query: 304 SIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPE 125
           S+DMSPVKIFKNPEG           LIK          RTMLDSIPKDLNRPWEDPMPE
Sbjct: 423 SMDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE 482

Query: 124 TGERHLAQELRGVGLSAYDLPEWKKDAYGKALTFGQRSKLS 2
           TGERHLAQELRGVGLSAYD+PEWKKDA+GKALTFGQRSKLS
Sbjct: 483 TGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLS 523


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  209 bits (531), Expect = 2e-52
 Identities = 108/161 (67%), Positives = 116/161 (72%)
 Frame = -2

Query: 484 SPERWEAKQLIASGVMSVKEYPMFDEEGDGMXXXXXXXXXXXXXXXXXXXXXXLQGQSRY 305
           SPERWEAKQLIASGV+ V++YPMFDE+GDGM                      LQGQSR+
Sbjct: 419 SPERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRF 478

Query: 304 SIDMSPVKIFKNPEGXXXXXXXXXXXLIKXXXXXXXXXXRTMLDSIPKDLNRPWEDPMPE 125
           SIDMSPVKIFKNPEG           LIK          R MLDSIPKDLNRPWEDPMP+
Sbjct: 479 SIDMSPVKIFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPD 538

Query: 124 TGERHLAQELRGVGLSAYDLPEWKKDAYGKALTFGQRSKLS 2
           TGERHLAQELRGVGLSAYD+PEWKK+AYGKALTFGQRSKLS
Sbjct: 539 TGERHLAQELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLS 579


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