BLASTX nr result

ID: Scutellaria24_contig00023229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023229
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   199   2e-49
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   197   6e-49
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
ref|NP_974208.1| DEAD-box ATP-dependent RNA helicase 41 [Arabido...   189   2e-46
ref|NP_850499.1| DEAD-box ATP-dependent RNA helicase 41 [Arabido...   189   2e-46

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  199 bits (506), Expect = 2e-49
 Identities = 98/127 (77%), Positives = 116/127 (91%)
 Frame = -1

Query: 383 LTPTRELSIQVEEQAKLLGQGLPFKTALVVGGDAMAGQVHRIQQGVSMIVGTPGRIIDLL 204
           LTPTREL +QVEEQAKLLG+GLPFKTALVVGGDAM  Q+HRIQQGV +IVGTPGR+IDLL
Sbjct: 218 LTPTRELCMQVEEQAKLLGKGLPFKTALVVGGDAMPRQLHRIQQGVELIVGTPGRLIDLL 277

Query: 203 TKHDFELDTVSILVIDEVDCMIEKGFREQVMQIFQALSQPQVLMYSATVSKEVEIVSGSM 24
           +KH+ ELD V +LV+DEVDCM+E+GFR+QVMQI++ALSQPQVLMYSAT+S+EVE V+ SM
Sbjct: 278 SKHEIELDDVFMLVLDEVDCMLERGFRDQVMQIYRALSQPQVLMYSATISQEVEKVASSM 337

Query: 23  VKDLTVI 3
            KD+ VI
Sbjct: 338 AKDIIVI 344


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  197 bits (502), Expect = 6e-49
 Identities = 96/127 (75%), Positives = 115/127 (90%)
 Frame = -1

Query: 383 LTPTRELSIQVEEQAKLLGQGLPFKTALVVGGDAMAGQVHRIQQGVSMIVGTPGRIIDLL 204
           LTPTREL IQVE+QAKL G+GLPFKTALVVGGDAMAGQ++RIQQGV +IVGTPGR+IDLL
Sbjct: 200 LTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAMAGQLYRIQQGVELIVGTPGRLIDLL 259

Query: 203 TKHDFELDTVSILVIDEVDCMIEKGFREQVMQIFQALSQPQVLMYSATVSKEVEIVSGSM 24
           TKHD ELD + I VIDEVDCM+++GFR+QVMQIF ALSQPQVL+YSATV++EVE ++ SM
Sbjct: 260 TKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFWALSQPQVLLYSATVTQEVEKMASSM 319

Query: 23  VKDLTVI 3
            KD+ ++
Sbjct: 320 AKDMALV 326


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  196 bits (498), Expect = 2e-48
 Identities = 96/127 (75%), Positives = 114/127 (89%)
 Frame = -1

Query: 383 LTPTRELSIQVEEQAKLLGQGLPFKTALVVGGDAMAGQVHRIQQGVSMIVGTPGRIIDLL 204
           LTPTREL IQVEEQAKLLG+GLPFKTALV+GGDAM  Q++RIQQGV +IVGTPGR+IDLL
Sbjct: 205 LTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYRIQQGVELIVGTPGRLIDLL 264

Query: 203 TKHDFELDTVSILVIDEVDCMIEKGFREQVMQIFQALSQPQVLMYSATVSKEVEIVSGSM 24
            KHD ELD + ILV+DEVDCM+++GFR+QVMQIF+ALSQPQVLMYSAT+S+EVE ++ SM
Sbjct: 265 AKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQVLMYSATMSQEVEKMASSM 324

Query: 23  VKDLTVI 3
            KDL  +
Sbjct: 325 AKDLIFV 331


>ref|NP_974208.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana]
           gi|79295464|ref|NP_001030621.1| DEAD-box ATP-dependent
           RNA helicase 41 [Arabidopsis thaliana]
           gi|108861894|sp|Q3EBD3.1|RH41_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 41
           gi|332640235|gb|AEE73756.1| DEAD-box ATP-dependent RNA
           helicase 41 [Arabidopsis thaliana]
           gi|332640237|gb|AEE73758.1| DEAD-box ATP-dependent RNA
           helicase 41 [Arabidopsis thaliana]
          Length = 505

 Score =  189 bits (480), Expect = 2e-46
 Identities = 86/127 (67%), Positives = 113/127 (88%)
 Frame = -1

Query: 383 LTPTRELSIQVEEQAKLLGQGLPFKTALVVGGDAMAGQVHRIQQGVSMIVGTPGRIIDLL 204
           L PTREL +QVE+QAK+LG+GLPFKTALVVGGD M+GQ++RIQQGV +I+GTPGR++DLL
Sbjct: 192 LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLL 251

Query: 203 TKHDFELDTVSILVIDEVDCMIEKGFREQVMQIFQALSQPQVLMYSATVSKEVEIVSGSM 24
           +KH  ELD +   V+DEVDCM+++GFR+QVMQIFQALSQPQVL++SAT+S+EVE V GS+
Sbjct: 252 SKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQPQVLLFSATISREVEKVGGSL 311

Query: 23  VKDLTVI 3
            K++ ++
Sbjct: 312 AKEIILV 318


>ref|NP_850499.1| DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis thaliana]
           gi|17473849|gb|AAL38348.1| unknown protein [Arabidopsis
           thaliana] gi|24899713|gb|AAN65071.1| unknown protein
           [Arabidopsis thaliana] gi|332640236|gb|AEE73757.1|
           DEAD-box ATP-dependent RNA helicase 41 [Arabidopsis
           thaliana]
          Length = 368

 Score =  189 bits (480), Expect = 2e-46
 Identities = 86/127 (67%), Positives = 113/127 (88%)
 Frame = -1

Query: 383 LTPTRELSIQVEEQAKLLGQGLPFKTALVVGGDAMAGQVHRIQQGVSMIVGTPGRIIDLL 204
           L PTREL +QVE+QAK+LG+GLPFKTALVVGGD M+GQ++RIQQGV +I+GTPGR++DLL
Sbjct: 55  LAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLL 114

Query: 203 TKHDFELDTVSILVIDEVDCMIEKGFREQVMQIFQALSQPQVLMYSATVSKEVEIVSGSM 24
           +KH  ELD +   V+DEVDCM+++GFR+QVMQIFQALSQPQVL++SAT+S+EVE V GS+
Sbjct: 115 SKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQPQVLLFSATISREVEKVGGSL 174

Query: 23  VKDLTVI 3
            K++ ++
Sbjct: 175 AKEIILV 181


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