BLASTX nr result

ID: Scutellaria24_contig00023207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023207
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   194   1e-47
ref|XP_002511070.1| pentatricopeptide repeat-containing protein,...   179   6e-43
dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]                          172   5e-41
ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|2...   169   6e-40
ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containi...   164   1e-38

>ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61800 [Vitis vinifera]
          Length = 576

 Score =  194 bits (494), Expect = 1e-47
 Identities = 118/222 (53%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
 Frame = -2

Query: 641 SHLIAILKCSCKSAAQIHQVHAQSIARGL------SSLLLPHILHACTFSLSKPTGVSFT 480
           S  I +++  CKS  Q+HQVHA +I  GL      SSLLL +IL A T +L   T  S T
Sbjct: 16  SEAITVIR-QCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFT-ALLPTTNASPT 73

Query: 479 SGVA---YSSKIFDLILYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRTFP 309
           +  A   Y+  +F+ I  PS F YN +IRAHTLL SP  AL  F +MRR SV PD  TFP
Sbjct: 74  TPAALTGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFP 133

Query: 308 LVLKACGLLQNSLSSVRILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLF 129
             LKAC LL  +LS  + LH+Q+ KFGF AD+FVCNTL  VY     +  A  VF  T  
Sbjct: 134 FCLKACSLLP-ALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSL 192

Query: 128 KDVVSYNVMIDGFVKAGEIDHARELFDEMPQRDAVSWGTLLA 3
           KDVVSYN +I GF+K G+ D AR LFD+MP RDAVSWGTLLA
Sbjct: 193 KDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLA 234


>ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550185|gb|EEF51672.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 551

 Score =  179 bits (453), Expect = 6e-43
 Identities = 106/218 (48%), Positives = 139/218 (63%), Gaps = 4/218 (1%)
 Frame = -2

Query: 644 LSHLIAILKCSCKSAAQIHQVHAQSIARGLSSLLL---PHILHACTFSLSK-PTGVSFTS 477
           LSH I  L   CK+  Q++QVHAQ+  +GL SL     P IL    ++L+  PT  S  S
Sbjct: 26  LSHSIYTLIRQCKTINQLYQVHAQAFTKGLLSLTACSSPQILTKILYALTTIPTPKSSFS 85

Query: 476 GVAYSSKIFDLILYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRTFPLVLK 297
            + Y+   FD I  PS F YN +IR HTL  S  +AL+FF QMRR SV PDF ++P  LK
Sbjct: 86  LLHYAVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALK 145

Query: 296 ACGLLQNSLSSVRILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVV 117
           AC  L+  LS  + LH+Q  KFGF +D++V N+L  VY     ++ A  VF+ +  +DVV
Sbjct: 146 ACAHLR-VLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVV 204

Query: 116 SYNVMIDGFVKAGEIDHARELFDEMPQRDAVSWGTLLA 3
           SYN ++DGFVKAGE   ARE+FD MP RD+VSWG+L+A
Sbjct: 205 SYNALVDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIA 242


>dbj|BAJ53111.1| JHL07K02.1 [Jatropha curcas]
          Length = 248

 Score =  172 bits (436), Expect = 5e-41
 Identities = 97/209 (46%), Positives = 131/209 (62%), Gaps = 6/209 (2%)
 Frame = -2

Query: 611 CKSAAQIHQVHAQSIARGLSSL------LLPHILHACTFSLSKPTGVSFTSGVAYSSKIF 450
           CK+   +HQ+HA +I  G  SL      +L  IL++     +  T  S TS + Y+  +F
Sbjct: 21  CKTIHHLHQLHANAITNGFLSLNSSSQKILTKILYSLN---ATATSKSSTSLLQYAVSVF 77

Query: 449 DLILYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRTFPLVLKACGLLQNSL 270
             I  PS F YN VIRAHTL  SP +AL FF QMRR S+ PDF +FP V KAC  L+   
Sbjct: 78  SAITNPSPFCYNLVIRAHTLHSSPLSALRFFLQMRRFSIPPDFHSFPFVFKACSQLRVFF 137

Query: 269 SSVRILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMIDGF 90
            +   LH+Q+ KFGF +D++V N+L  VY     +  A  VF+ +  KDVVSYN +IDGF
Sbjct: 138 LA-NSLHSQAFKFGFMSDLYVVNSLIHVYSVSDRLCDAYQVFDESPRKDVVSYNAVIDGF 196

Query: 89  VKAGEIDHARELFDEMPQRDAVSWGTLLA 3
           VK G+++ AR+LFD MP RD+VSWGT+++
Sbjct: 197 VKVGDVEKARKLFDRMPVRDSVSWGTIIS 225


>ref|XP_002318186.1| predicted protein [Populus trichocarpa] gi|222858859|gb|EEE96406.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  169 bits (427), Expect = 6e-40
 Identities = 102/215 (47%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
 Frame = -2

Query: 641 SHLIAILKCSCKSAAQIHQVHAQSIARG-LSSLLLPHILHACTFSLS-KPTGVSFTSGVA 468
           S +I ++K  CK+ +Q+HQ+HA +I    LS    P +L    ++L+ K    S TS + 
Sbjct: 17  SIIIKLIK-QCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTLTTKAKSKSSTSLLH 75

Query: 467 YSSKIFDLILYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRTFPLVLKACG 288
           Y+  IF+ I  PS F YN +IR HTLL  P  AL+FF QMRR SV  D  +FP  LKAC 
Sbjct: 76  YAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVPLDSHSFPFTLKACA 135

Query: 287 LLQNSLSSVRILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYN 108
            L   + S R LH Q LKFGF +D++V N+L   Y      + A  VF+ +  +DVVSYN
Sbjct: 136 QL-GGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKVFDESPQRDVVSYN 194

Query: 107 VMIDGFVKAGEIDHARELFDEMPQRDAVSWGTLLA 3
           V+IDGFVKAG++  ARELFD MP RD+VSW T++A
Sbjct: 195 VLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIA 229


>ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61800-like [Glycine max]
          Length = 577

 Score =  164 bits (416), Expect = 1e-38
 Identities = 99/206 (48%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
 Frame = -2

Query: 611 CKSAAQIHQVHAQSIARGLSSLLLPHILHACTFSLSKPTGVSFTSG---VAYSSKIFDLI 441
           CKS +Q+HQVHA SI  GL  L    IL+    +LS     S  S      Y+  +F  I
Sbjct: 10  CKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSLFHSI 69

Query: 440 LYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRTFPLVLKACGLLQNSLSSV 261
             PS F +N +IR HTLL SP  AL+ F+ +RR S+ PDF TFP VLKA   L +SLS  
Sbjct: 70  PNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQL-HSLSLA 128

Query: 260 RILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGTLFKDVVSYNVMIDGFVKA 81
           + LH+Q+LKFG   D+F  NTL  VY     V+ A  +F      DVVSYN +I G VK 
Sbjct: 129 QSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLVKT 188

Query: 80  GEIDHARELFDEMPQRDAVSWGTLLA 3
            +I  ARELFDEMP RD +SWGT++A
Sbjct: 189 RQISRARELFDEMPVRDEISWGTMIA 214



 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 41/151 (27%), Positives = 68/151 (45%)
 Frame = -2

Query: 494 GVSFTSGVAYSSKIFDLILYPSAFDYNAVIRAHTLLRSPHTALNFFAQMRRKSVWPDFRT 315
           G+  T  ++ + ++FD +       +  +I  ++ L+  + A+  F +M R  V PD   
Sbjct: 184 GLVKTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIA 243

Query: 314 FPLVLKACGLLQNSLSSVRILHAQSLKFGFFADVFVCNTLSCVYCRGGDVDGAKGVFEGT 135
              VL AC  L   L    I+H    +     D ++   L  +Y + G V+ A+ VFE  
Sbjct: 244 LVSVLSACAQL-GELEQGSIVHDYIKRNRIRVDSYLATGLVDLYAKCGCVETARDVFESC 302

Query: 134 LFKDVVSYNVMIDGFVKAGEIDHARELFDEM 42
           + K V ++N M+ GF   GE     E F  M
Sbjct: 303 MEKYVFTWNAMLVGFAIHGEGSMVLEYFSRM 333


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