BLASTX nr result

ID: Scutellaria24_contig00023146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00023146
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   130   2e-28
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...   123   2e-26
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   119   3e-25
ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein ...   115   8e-24
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   115   8e-24

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  130 bits (326), Expect = 2e-28
 Identities = 68/108 (62%), Positives = 85/108 (78%), Gaps = 3/108 (2%)
 Frame = -2

Query: 464 MHFINRF-CPASTTPLHRLLARRLSCTQLFIG--GLSNDTNESILKNAFEEYGEIIEVKV 294
           M  +NRF C +  +P  R L  R SC +LFIG  GLS DTNE+ILK+AF +YGEIIEVKV
Sbjct: 1   MQSLNRFRCLSPASPCFRWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKV 60

Query: 293 ICDRVSGKSRGYGFVRYSSEEAASKALKELNGQLLDGRNIRVHHAHRG 150
           ICD VSGKS+GYGFV+++S++ A  ALKE++GQ LDGRNIRV +AH+G
Sbjct: 61  ICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHKG 108


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/100 (62%), Positives = 76/100 (76%)
 Frame = -2

Query: 458 FINRFCPASTTPLHRLLARRLSCTQLFIGGLSNDTNESILKNAFEEYGEIIEVKVICDRV 279
           F+ R C  S+    R L  R SC++LF+GGLS DTNE +LKN FE+YGE+IEVKVICD  
Sbjct: 6   FVRRNCLTSSL---RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHK 62

Query: 278 SGKSRGYGFVRYSSEEAASKALKELNGQLLDGRNIRVHHA 159
           SGKS+GYGFV + SEEAA+ AL  +N QLL+GRNIRV +A
Sbjct: 63  SGKSKGYGFVLFDSEEAAASALASMNNQLLEGRNIRVEYA 102


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  119 bits (299), Expect = 3e-25
 Identities = 63/115 (54%), Positives = 79/115 (68%), Gaps = 3/115 (2%)
 Frame = -2

Query: 485 LNLRGRKMHFINRFCPASTTPLHR---LLARRLSCTQLFIGGLSNDTNESILKNAFEEYG 315
           +NL+   M   +     S    H    L  R  S T+LF+ GLS DTNE IL++AF ++G
Sbjct: 23  INLKFTVMQITSALVNGSALRFHLPRFLCVRHHSSTKLFVTGLSYDTNEPILRDAFGQHG 82

Query: 314 EIIEVKVICDRVSGKSRGYGFVRYSSEEAASKALKELNGQLLDGRNIRVHHAHRG 150
           EIIEVKVICD V+GKSRGYGFVR+ SE  A+ A KE+NGQ+LDGR IRV +AH+G
Sbjct: 83  EIIEVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQILDGRRIRVSYAHKG 137


>ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Brachypodium distachyon]
          Length = 109

 Score =  115 bits (287), Expect = 8e-24
 Identities = 56/99 (56%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
 Frame = -2

Query: 437 ASTTPLHRLLARRL---SCTQLFIGGLSNDTNESILKNAFEEYGEIIEVKVICDRVSGKS 267
           +ST PL  LL R     SC++LF+GGLS DTNE  LK+AF ++G + EVKVIC  V+G+S
Sbjct: 11  SSTIPLRNLLNRSANFSSCSKLFVGGLSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRS 70

Query: 266 RGYGFVRYSSEEAASKALKELNGQLLDGRNIRVHHAHRG 150
           +GYGFV++SSE  A+ AL++++ +LLDGRNIRVH+A+ G
Sbjct: 71  KGYGFVKFSSESEAAAALEKMSNELLDGRNIRVHYANSG 109


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  115 bits (287), Expect = 8e-24
 Identities = 65/130 (50%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = -2

Query: 536 LS*VIVTFSLFRILEEKLNLRGRKMHF-INRFCPASTTPLHRLLARRLSCTQLFIGGLSN 360
           +S + + F++ RI    +N  G  +HF + RF          L  R  S  +LF+ GLS 
Sbjct: 20  VSDINLKFTVMRIASALVN--GSALHFHLPRF----------LYVRHHSSIKLFVTGLSY 67

Query: 359 DTNESILKNAFEEYGEIIEVKVICDRVSGKSRGYGFVRYSSEEAASKALKELNGQLLDGR 180
           DTNE +L++AF ++GEIIEVKVICD V+GKSRGYGFVR+ SE  A+   KE+NGQ+LDGR
Sbjct: 68  DTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAATHKEMNGQILDGR 127

Query: 179 NIRVHHAHRG 150
            IRV +AH+G
Sbjct: 128 CIRVSYAHKG 137


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