BLASTX nr result

ID: Scutellaria24_contig00022919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022919
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532295.1| geranylgeranyl transferase type I beta subun...   110   9e-23
ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1...   104   9e-21
ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Ca...   100   2e-19
ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1...    96   3e-18

>ref|XP_002532295.1| geranylgeranyl transferase type I beta subunit, putative [Ricinus
           communis] gi|223527997|gb|EEF30079.1| geranylgeranyl
           transferase type I beta subunit, putative [Ricinus
           communis]
          Length = 370

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/61 (81%), Positives = 57/61 (93%)
 Frame = +3

Query: 3   EALRGFLFTCQSQYGGFSKFPRLLPDLYHSYYGFCAFSLLKEPGLNSLCVELGLTDVAAI 182
           +ALRGFL TCQS+YGGFSKFP  LPD+YHSYYG+ AFSLL+EPGLNSLCVELG+TDVAA+
Sbjct: 309 KALRGFLITCQSKYGGFSKFPGELPDIYHSYYGYTAFSLLEEPGLNSLCVELGITDVAAL 368

Query: 183 G 185
           G
Sbjct: 369 G 369


>ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta [Vitis
           vinifera] gi|296086228|emb|CBI31669.3| unnamed protein
           product [Vitis vinifera]
          Length = 351

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/61 (77%), Positives = 53/61 (86%)
 Frame = +3

Query: 3   EALRGFLFTCQSQYGGFSKFPRLLPDLYHSYYGFCAFSLLKEPGLNSLCVELGLTDVAAI 182
           +AL GFL TCQSQYGGFSKFP  LPDLYHSYYGF AFS+L+EPGL  +CVELG+ D+AAI
Sbjct: 290 KALHGFLLTCQSQYGGFSKFPGQLPDLYHSYYGFSAFSMLEEPGLIPICVELGIADIAAI 349

Query: 183 G 185
           G
Sbjct: 350 G 350


>ref|XP_002312088.1| predicted protein [Populus trichocarpa] gi|222851908|gb|EEE89455.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = +3

Query: 6   ALRGFLFTCQSQYGGFSKFPRLLPDLYHSYYGFCAFSLLKEPGLNSLCVELGLTDVAAIG 185
           ALRGFL TCQS+YGGFSKFP  LPDLYHSYYG+ A SLL+EPGLN+L VELG+T  AA+G
Sbjct: 312 ALRGFLLTCQSEYGGFSKFPNELPDLYHSYYGYTALSLLEEPGLNALSVELGITGFAALG 371


>gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Catharanthus roseus]
          Length = 359

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = +3

Query: 9   LRGFLFTCQSQYGGFSKFPRLLPDLYHSYYGFCAFSLLKEPGLNSLCVELGLTDVAAIG 185
           LRGFL +CQSQYGGFSKFP  LPDLYH+YYGFCAFSLL+EP L  + VELG+TD+AA G
Sbjct: 298 LRGFLLSCQSQYGGFSKFPGQLPDLYHTYYGFCAFSLLEEPDLKPIHVELGMTDIAATG 356


>ref|XP_004142747.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Cucumis sativus] gi|449483868|ref|XP_004156717.1|
           PREDICTED: geranylgeranyl transferase type-1 subunit
           beta-like [Cucumis sativus]
          Length = 363

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/59 (74%), Positives = 51/59 (86%)
 Frame = +3

Query: 3   EALRGFLFTCQSQYGGFSKFPRLLPDLYHSYYGFCAFSLLKEPGLNSLCVELGLTDVAA 179
           +AL+ FL TCQS+YGGFSKFP   PDLYHSYYGF AFSLL+EP +NSL VELG+TDV+A
Sbjct: 302 KALKAFLLTCQSKYGGFSKFPMDFPDLYHSYYGFTAFSLLEEPDINSLFVELGITDVSA 360


Top