BLASTX nr result

ID: Scutellaria24_contig00022867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022867
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512156.1| DNA binding protein, putative [Ricinus commu...   116   4e-24
ref|XP_002330891.1| bromodomain protein [Populus trichocarpa] gi...   115   6e-24
emb|CBI32173.3| unnamed protein product [Vitis vinifera]              115   8e-24
ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263...   115   8e-24
ref|NP_181971.1| DNA-binding bromodomain-containing protein [Ara...   111   1e-22

>ref|XP_002512156.1| DNA binding protein, putative [Ricinus communis]
           gi|223548700|gb|EEF50190.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 641

 Score =  116 bits (290), Expect = 4e-24
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
 Frame = +3

Query: 183 ETKDDVSPPAWGTWEELLLAFAVNRHGTAAWDSIASELQRRTSDPNLSLTAQNCRSKYID 362
           + +++ +   WGTWEELLLA AV RHG   WDS++ ELQ RTS P+   +A+NC+ KY D
Sbjct: 13  QNREEEAEERWGTWEELLLACAVKRHGFKNWDSVSMELQTRTSLPHFLTSARNCQQKYHD 72

Query: 363 LKRRFVATNGDL----EDDDVRDEKSNVAESVPLLEELRKLRVAELRREVQRYDLNI 521
           L RRF  +  D     E++D  +     +  +P LEELRKLRVAEL++EV RYD++I
Sbjct: 73  LHRRFTTSKNDFVQPQEEEDENNSNKVASIHIPWLEELRKLRVAELKQEVHRYDISI 129


>ref|XP_002330891.1| bromodomain protein [Populus trichocarpa]
           gi|222872713|gb|EEF09844.1| bromodomain protein [Populus
           trichocarpa]
          Length = 643

 Score =  115 bits (289), Expect = 6e-24
 Identities = 64/119 (53%), Positives = 80/119 (67%), Gaps = 15/119 (12%)
 Frame = +3

Query: 210 AWGTWEELLLAFAVNRHGTAAWDSIASELQRRTSDPNLSLTAQNCRSKYIDLKRRFVAT- 386
           +WGTWEELLLA AV RHG   WDS+A ELQ +T  P+L  TAQ C+ KY+DL RRF  T 
Sbjct: 15  SWGTWEELLLASAVKRHGFKNWDSVALELQTKTCLPHLLTTAQICQQKYLDLNRRFNTTT 74

Query: 387 ------NGDLEDDDVRDEKSNV--------AESVPLLEELRKLRVAELRREVQRYDLNI 521
                 N   E+D+  +E++N+          SVP LEELRKLRVAEL++EVQRYD++I
Sbjct: 75  INNLHHNHTPEEDNQDEEQNNINTDIINNNIVSVPWLEELRKLRVAELKQEVQRYDVSI 133


>emb|CBI32173.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  115 bits (288), Expect = 8e-24
 Identities = 63/108 (58%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
 Frame = +3

Query: 213 WGTWEELLLAFAVNRHGTAAWDSIASELQRRTSDPNLSLTAQNCRSKYIDLKRRFVATNG 392
           W TWEELLLA AV RHG   WDS+A E+Q R+S P+L  TAQNC+ KY DLKRRF AT  
Sbjct: 32  WTTWEELLLACAVKRHGFQNWDSVAMEIQTRSSLPHLLTTAQNCQQKYHDLKRRFTATAK 91

Query: 393 DLE-----DDDVRDEKSNVAESVPLLEELRKLRVAELRREVQRYDLNI 521
           D +      + VRDE     +++P LEELRKLRVAELR EV R D++I
Sbjct: 92  DNDAETQSQNQVRDE----TDTIPWLEELRKLRVAELRNEVHRSDVSI 135


>ref|XP_002268328.1| PREDICTED: uncharacterized protein LOC100263099 [Vitis vinifera]
           gi|147768907|emb|CAN75881.1| hypothetical protein
           VITISV_024454 [Vitis vinifera]
          Length = 686

 Score =  115 bits (288), Expect = 8e-24
 Identities = 63/108 (58%), Positives = 75/108 (69%), Gaps = 5/108 (4%)
 Frame = +3

Query: 213 WGTWEELLLAFAVNRHGTAAWDSIASELQRRTSDPNLSLTAQNCRSKYIDLKRRFVATNG 392
           W TWEELLLA AV RHG   WDS+A E+Q R+S P+L  TAQNC+ KY DLKRRF AT  
Sbjct: 32  WTTWEELLLACAVKRHGFQNWDSVAMEIQTRSSLPHLLTTAQNCQQKYHDLKRRFTATAK 91

Query: 393 DLE-----DDDVRDEKSNVAESVPLLEELRKLRVAELRREVQRYDLNI 521
           D +      + VRDE     +++P LEELRKLRVAELR EV R D++I
Sbjct: 92  DNDAETQSQNQVRDE----TDTIPWLEELRKLRVAELRNEVHRSDVSI 135


>ref|NP_181971.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
           gi|3128185|gb|AAC16089.1| unknown protein [Arabidopsis
           thaliana] gi|21539425|gb|AAM53265.1| unknown protein
           [Arabidopsis thaliana] gi|32306497|gb|AAP78932.1|
           At2g44430 [Arabidopsis thaliana]
           gi|330255325|gb|AEC10419.1| DNA-binding
           bromodomain-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  111 bits (277), Expect = 1e-22
 Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +3

Query: 210 AWGTWEELLLAFAVNRHGTAAWDSIASELQRRTSDPNLSLTAQNCRSKYIDLKRRF---V 380
           AWGTWEELLLA AV RHG   WDS+A+E++ R+S  +L  +A +CR KY DLKRRF    
Sbjct: 49  AWGTWEELLLACAVKRHGFGDWDSVATEVRSRSSLSHLLASANDCRHKYRDLKRRFHEQE 108

Query: 381 ATNGDLEDDDVRDEKSNVAESVPLLEELRKLRVAELRREVQRYDLNI 521
            T+     ++  +E+  V  ++P LE+LR LRVAELRREV+RYD +I
Sbjct: 109 KTDVTATVEEEEEEEERVGNNIPWLEQLRNLRVAELRREVERYDCSI 155


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