BLASTX nr result

ID: Scutellaria24_contig00022864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022864
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   234   1e-59
ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana] ...   215   6e-54
ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_002869236.1| hypothetical protein ARALYDRAFT_491404 [Arab...   214   2e-53
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   212   7e-53

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
           gi|296081842|emb|CBI20847.3| unnamed protein product
           [Vitis vinifera]
          Length = 715

 Score =  234 bits (597), Expect = 1e-59
 Identities = 128/234 (54%), Positives = 161/234 (68%), Gaps = 11/234 (4%)
 Frame = -1

Query: 669 MPGLTSDSGEFNSLAIVPHSLETQSPRVYPLRTQRVTGPFARLSISWARGNTLRVXXXXX 490
           MPGLT+DSG     A+VP S E     VYPL    +  P +RLSISW+RGN LRV     
Sbjct: 1   MPGLTADSGN----ALVPLSPEAHVSVVYPLH-HGLKPPISRLSISWSRGNALRVSVFRE 55

Query: 489 XXXXXXLN---TGGEVVEVKLSNVDGGEISDAQWRKIAYGSVTPFALLQSR--------K 343
                  +    GG+VV+VKL   DG E+ DAQWR+IAYGSV+PFALLQSR        K
Sbjct: 56  LPAESSDSDGEAGGKVVQVKLGVADG-EVDDAQWRRIAYGSVSPFALLQSRRNSVLALSK 114

Query: 342 ISVNAMLYDKDRWEHVMEYSKEINRLLSDSNSSVTPAIEDPKTVLKKVAEPTSLKAAWEL 163
           +S+++  Y  D WE+VMEYSK+I+ LL ++ S     I+DPKTVLKKV EPT LKAAW L
Sbjct: 115 MSMSSSPYHPDWWEYVMEYSKDISSLLDNAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGL 174

Query: 162 IELFYADKQYQAWIPERLLDWLADFDCLLSATQPTVHARLVAFQKELVTIQAVE 1
           +E+FYADK+ QAW+PER++DWLAD+D L S TQ TVH++LV FQKE+V +Q +E
Sbjct: 175 LEIFYADKESQAWLPERIVDWLADYDVLFSGTQATVHSKLVEFQKEIVRLQVIE 228


>ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75158853|sp|Q8RXH2.1|NUP85_ARATH RecName:
           Full=Nuclear pore complex protein Nup85; AltName:
           Full=Nucleoporin Nup85 gi|19698819|gb|AAL91145.1|
           putative protein [Arabidopsis thaliana]
           gi|332660742|gb|AEE86142.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 716

 Score =  215 bits (548), Expect = 6e-54
 Identities = 118/233 (50%), Positives = 161/233 (69%), Gaps = 10/233 (4%)
 Frame = -1

Query: 669 MPGLTSDSGEFNSLAIVPHSLETQSPRVYPLRTQRVTGPFARLSISWARGNTLRVXXXXX 490
           MPG++S+SG      +V  S + ++P +YPL +  +  P  RLSISW  GN LRV     
Sbjct: 1   MPGMSSESGGGE---LVLFSTKEKTPVLYPL-SYGLKSPVHRLSISWGCGNNLRVTVLRN 56

Query: 489 XXXXXXLN--TGGEVVEVKLSNVDGGEISDAQWRKIAYGSVTPFALLQSRKISVNAM--- 325
                  +   GG+VV V+LS  DG EISD QWR+IAYGSV+PFALLQSR+ S++++   
Sbjct: 57  PELRDDDDGEVGGKVVNVRLSGEDG-EISDPQWRRIAYGSVSPFALLQSRRNSISSLSKM 115

Query: 324 -----LYDKDRWEHVMEYSKEINRLLSDSNSSVTPAIEDPKTVLKKVAEPTSLKAAWELI 160
                LY    WE+VMEYS++I  LLS++ S   P IEDP++V+K   EPTSLKAAWEL+
Sbjct: 116 DMSSSLYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWELM 175

Query: 159 ELFYADKQYQAWIPERLLDWLADFDCLLSATQPTVHARLVAFQKELVTIQAVE 1
           ELFYADK   +W+PERL+DWL+++D LLS++ PT++++L  FQKELV +QA+E
Sbjct: 176 ELFYADKTCLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIE 228


>ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|222865653|gb|EEF02784.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  214 bits (546), Expect = 1e-53
 Identities = 120/233 (51%), Positives = 150/233 (64%), Gaps = 10/233 (4%)
 Frame = -1

Query: 669 MPGLTSDSGEFNSLA-IVPHSLETQSPRVYPLRTQRVTGPFARLSISWARGNTLRVXXXX 493
           MP + +DS    S   +VP   +T+   VYPL    +  P +R+SISWARGN LRV    
Sbjct: 1   MPDVAADSAASASAGELVPFVPDTEIAVVYPLH-HGLKPPISRVSISWARGNNLRVSLLR 59

Query: 492 XXXXXXXLN--TGGEVVEVKLSNVDGGEISDAQWRKIAYGSVTPFALLQSRKISVNAMLY 319
                   +   GG+VVEV L +        AQWR+IAYGSVTPFALLQSRK S + +  
Sbjct: 60  NPPSNSDSDGEIGGKVVEVNLDSGAADVREPAQWRRIAYGSVTPFALLQSRKNSASILSK 119

Query: 318 DKDR-------WEHVMEYSKEINRLLSDSNSSVTPAIEDPKTVLKKVAEPTSLKAAWELI 160
            +         W++VMEYSK+I  LL +  S+  P IEDPK VLKK  EPTSLKAAWEL+
Sbjct: 120 LQSSPSPFHLDWQYVMEYSKDIKELLGNPKSNYNPLIEDPKEVLKKGEEPTSLKAAWELM 179

Query: 159 ELFYADKQYQAWIPERLLDWLADFDCLLSATQPTVHARLVAFQKELVTIQAVE 1
           E+FYADK  Q+W+PERL+DWLAD+DCLLS  QP VH++LV FQ  LVT+Q +E
Sbjct: 180 EMFYADKLCQSWLPERLVDWLADYDCLLSGDQPAVHSKLVEFQGTLVTLQVIE 232


>ref|XP_002869236.1| hypothetical protein ARALYDRAFT_491404 [Arabidopsis lyrata subsp.
           lyrata] gi|297315072|gb|EFH45495.1| hypothetical protein
           ARALYDRAFT_491404 [Arabidopsis lyrata subsp. lyrata]
          Length = 716

 Score =  214 bits (544), Expect = 2e-53
 Identities = 119/233 (51%), Positives = 160/233 (68%), Gaps = 10/233 (4%)
 Frame = -1

Query: 669 MPGLTSDSGEFNSLAIVPHSLETQSPRVYPLRTQRVTGPFARLSISWARGNTLRVXXXXX 490
           MPG+TS+SG      +V  S + + P +YPL +  +  P  RLSISW  GN LRV     
Sbjct: 1   MPGITSESGGGE---LVLSSAKEKVPVLYPL-SYGLKSPVHRLSISWGCGNNLRVTVLRN 56

Query: 489 XXXXXXLN--TGGEVVEVKLSNVDGGEISDAQWRKIAYGSVTPFALLQSRKISVNAM--- 325
                  +   GG+VV V+LS  DG EISDAQWR+IAYGSV+PFALLQSR+ S++++   
Sbjct: 57  PKLRDDNDGDAGGKVVNVRLSGEDG-EISDAQWRRIAYGSVSPFALLQSRRNSISSLSMM 115

Query: 324 -----LYDKDRWEHVMEYSKEINRLLSDSNSSVTPAIEDPKTVLKKVAEPTSLKAAWELI 160
                L+    WE+VMEYS++I  LLS++ SS  P IEDP++V+    EPTSLKAAWEL+
Sbjct: 116 DMSSSLHQTAWWEYVMEYSRDIKSLLSNTISSPAPLIEDPRSVITNAEEPTSLKAAWELM 175

Query: 159 ELFYADKQYQAWIPERLLDWLADFDCLLSATQPTVHARLVAFQKELVTIQAVE 1
           ELFYADK   +W+PERL+DWL+ +D LLS++ PT++++L  FQKELV +QA+E
Sbjct: 176 ELFYADKTCLSWLPERLVDWLSVYDILLSSSHPTIYSKLEDFQKELVGLQAIE 228


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  212 bits (539), Expect = 7e-53
 Identities = 115/221 (52%), Positives = 147/221 (66%), Gaps = 5/221 (2%)
 Frame = -1

Query: 648 SGEFNSLAIVPHSLETQSPRVYPLRTQRVTGPFARLSISWARGNTLRVXXXXXXXXXXXL 469
           S    ++A+VP + ++  P VYPL    +  P +RLSISWARG++LR+            
Sbjct: 3   SDTVGNVALVPFTGDSP-PAVYPLH-HGLAPPISRLSISWARGSSLRLSLFA-------- 52

Query: 468 NTGGEVVEVKLSNVDGGEISDAQWRKIAYGSVTPFALLQSRKISVNAML-----YDKDRW 304
               +VVEVKL+  D  EI DA WR+IAYGSV PFALLQSR+ S++A+L     Y  D W
Sbjct: 53  GAAAKVVEVKLAGEDS-EIPDAHWRRIAYGSVAPFALLQSRRSSLSALLKTPSPYRSDWW 111

Query: 303 EHVMEYSKEINRLLSDSNSSVTPAIEDPKTVLKKVAEPTSLKAAWELIELFYADKQYQAW 124
           EHV++YSKEI  LL       +P IEDP  + K+  EPTSLKAAWELIE+FY DKQ QAW
Sbjct: 112 EHVLQYSKEIGSLLGGPKLPASPIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQSQAW 171

Query: 123 IPERLLDWLADFDCLLSATQPTVHARLVAFQKELVTIQAVE 1
           +PERL+DWLAD+  L ++T  T+H +LV FQKELV IQ +E
Sbjct: 172 LPERLVDWLADYASLFTSTHETIHGKLVDFQKELVNIQVIE 212


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