BLASTX nr result

ID: Scutellaria24_contig00022863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022863
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   147   9e-34
ref|XP_003613818.1| RING finger protein [Medicago truncatula] gi...   146   2e-33
ref|XP_003613816.1| RING finger protein [Medicago truncatula] gi...   145   3e-33
gb|AFK38844.1| unknown [Lotus japonicus]                              143   1e-32
ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...   143   2e-32

>ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 231

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/132 (59%), Positives = 93/132 (70%), Gaps = 7/132 (5%)
 Frame = -2

Query: 509 GLRPASKASIDAMPSVEIVDG--DDQCVVCLEEFEAGGSAKEMPCKHRFHGHCIEKWLRI 336
           G  PASK SI+A+PSVEI +G  D +CVVCLEEF  GG AKEMPCKHRFHG+CIEKWL +
Sbjct: 93  GRPPASKESIEALPSVEIGEGNEDSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGM 152

Query: 335 NGCCPVCRYEMPVDEDEDASRKTREENDGERRRG----VWVSFDFGGGWRRWRD-DQNSS 171
           +G CPVCRYEMPV+E +    K REE  GERRR     VWVSF F    RR +D DQ  S
Sbjct: 153 HGSCPVCRYEMPVEEIDWG--KKREEEGGERRRSDGGEVWVSFSFNRSSRRNQDHDQADS 210

Query: 170 NERRENTDSSSN 135
            +  ++  SSS+
Sbjct: 211 GDSNDDDGSSSS 222


>ref|XP_003613818.1| RING finger protein [Medicago truncatula]
           gi|355515153|gb|AES96776.1| RING finger protein
           [Medicago truncatula]
          Length = 218

 Score =  146 bits (369), Expect = 2e-33
 Identities = 76/139 (54%), Positives = 90/139 (64%), Gaps = 9/139 (6%)
 Frame = -2

Query: 509 GLRPASKASIDAMPSVEIVDGDD-QCVVCLEEFEAGGSAKEMPCKHRFHGHCIEKWLRIN 333
           G  PA+K SI+AM  +EI +GD  +CVVCLEEFE GG  KEMPCKHRFHG CIEKWL I+
Sbjct: 80  GQPPATKESIEAMEKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIH 139

Query: 332 GCCPVCRYEMPVDEDEDASRKTREENDGERRR--------GVWVSFDFGGGWRRWRDDQN 177
           G CPVCRY MPVDE +D  +K  EE  GERRR         VWVSF      RR +D  +
Sbjct: 140 GSCPVCRYHMPVDEKDD-GKKREEEEGGERRRVGGGGGNGEVWVSFSINRSRRRNQDQAS 198

Query: 176 SSNERRENTDSSSNRQETE 120
           S  +  +++ S SN  E E
Sbjct: 199 SDVDSNDSSSSLSNDDEIE 217


>ref|XP_003613816.1| RING finger protein [Medicago truncatula]
           gi|355515151|gb|AES96774.1| RING finger protein
           [Medicago truncatula]
          Length = 222

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/135 (55%), Positives = 90/135 (66%), Gaps = 10/135 (7%)
 Frame = -2

Query: 509 GLRPASKASIDAMPSVEIVDGDD-QCVVCLEEFEAGGSAKEMPCKHRFHGHCIEKWLRIN 333
           G  PA+K SI+AM  +EI +GD  +CVVCLEEFE GG  KEMPCKHRFHG CIEKWL I+
Sbjct: 90  GQPPATKESIEAMDKIEIEEGDGGECVVCLEEFEVGGVVKEMPCKHRFHGKCIEKWLGIH 149

Query: 332 GCCPVCRYEMPVDEDEDASRKTREENDGERRR---------GVWVSFDFGGGWRRWRDDQ 180
           G CPVCRY+MPVD+++D  +K  EE  GERRR          VWVSF      RR +D  
Sbjct: 150 GSCPVCRYQMPVDQEDD-GKKREEEEGGERRRVGDGGGGNGEVWVSFSINRS-RRNQDQD 207

Query: 179 NSSNERRENTDSSSN 135
           +SSN R ++ D   N
Sbjct: 208 SSSNPREDDDDEVEN 222


>gb|AFK38844.1| unknown [Lotus japonicus]
          Length = 232

 Score =  143 bits (361), Expect = 1e-32
 Identities = 81/141 (57%), Positives = 97/141 (68%), Gaps = 10/141 (7%)
 Frame = -2

Query: 509 GLRPASKASIDAMPSVEIVDGDD---QCVVCLEEFEAGGSAKEMPCKHRFHGHCIEKWLR 339
           G  PASK SIDAMPSVE+ +GDD   +CVVCLE FE G   KEMPCKHRFH  CIEKWL 
Sbjct: 92  GRPPASKESIDAMPSVEVGEGDDDDGECVVCLEGFEVGKVVKEMPCKHRFHPDCIEKWLG 151

Query: 338 INGCCPVCRYEMPVDEDEDASRKTREEND--GERRR----GVWVSFDFGGGWRRWRDDQN 177
           I+G CPVCRYEMPV E++D  +K  EE +  GE RR     VWVSF F G  R    +Q 
Sbjct: 152 IHGSCPVCRYEMPV-EEKDVGKKGDEEGEEGGEERRRVGGEVWVSFSFNGSSRNQEPNQA 210

Query: 176 SSNERRENTDSSSN-RQETEV 117
            S++  +++DSSS+ R +TEV
Sbjct: 211 PSHD--DSSDSSSSPRGDTEV 229


>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score =  143 bits (360), Expect = 2e-32
 Identities = 77/134 (57%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
 Frame = -2

Query: 509 GLRPASKASIDAMPSVEIVDG--DDQCVVCLEEFEAGGSAKEMPCKHRFHGHCIEKWLRI 336
           G  PASKASI+AMP VEI +   D +C +CLEE+E GG  KEMPCKHRFHG C+EKWL+I
Sbjct: 90  GQPPASKASIEAMPKVEIGEDNKDGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKI 149

Query: 335 NGCCPVCRYEMPVDEDEDASRKTREENDG--ERR--RGVWVSFDFGGGWRRWRDDQNSSN 168
           +G CPVCRY+MPVDE+E    K R+E DG  ERR  R +WVSF F G  R    ++N SN
Sbjct: 150 HGNCPVCRYKMPVDEEE--LGKKRDEGDGGRERRVEREIWVSFAFNGSRRNGDSNENPSN 207

Query: 167 ERRENTDSSSNRQE 126
                 DSS+  QE
Sbjct: 208 ------DSSTEDQE 215


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