BLASTX nr result

ID: Scutellaria24_contig00022734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022734
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|XP_003588542.1| Pentatricopeptide repeat-containing protein ...    62   6e-08
ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]    62   6e-08
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 421

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/60 (50%), Positives = 42/60 (70%)
 Frame = -1

Query: 330 VICSYFRKEAYERLDIFLDSIRDSYKLGRSTFDXXXXXXXXXXXLEKLEMVVKEMRHAGL 151
           VICSYFR+EAY+RLDIFL+ ++  Y L +ST+D           LEK+E V+++M+ AGL
Sbjct: 361 VICSYFRREAYDRLDIFLECLKRCYVLNKSTYDLLISGYKRARLLEKVERVMEDMKSAGL 420


>ref|XP_003588542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477590|gb|AES58793.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 428

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/61 (49%), Positives = 40/61 (65%)
 Frame = -1

Query: 330 VICSYFRKEAYERLDIFLDSIRDSYKLGRSTFDXXXXXXXXXXXLEKLEMVVKEMRHAGL 151
           VICSYFRKEAY+RLDIFL+ I++ Y   RST+D            EK+++V+ +M   GL
Sbjct: 357 VICSYFRKEAYDRLDIFLECIKNCYVHTRSTYDLLISGYRRANLHEKVDLVLADMESVGL 416

Query: 150 A 148
           A
Sbjct: 417 A 417


>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Vitis vinifera]
           gi|296081891|emb|CBI20896.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = -1

Query: 330 VICSYFRKEAYERLDIFLDSIRDSYKLGRSTFDXXXXXXXXXXXLEKLEMVVKEMRHAG 154
           V+C+YFR+EAYERLD+FL  I+ SYKL +ST+D            EKL++V+  M+ AG
Sbjct: 360 VVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKLAG 418


>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
          Length = 1331

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = -1

Query: 330  VICSYFRKEAYERLDIFLDSIRDSYKLGRSTFDXXXXXXXXXXXLEKLEMVVKEMRHAG 154
            V+C+YFR+EAYERLD+FL  I+ SYKL +ST+D            EKL++V+  M+ AG
Sbjct: 1271 VVCAYFRREAYERLDLFLGHIKGSYKLTKSTYDLLVAGYRRAGLSEKLDLVMDGMKLAG 1329


>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = -1

Query: 330 VICSYFRKEAYERLDIFLDSIRDSYKLGRSTFDXXXXXXXXXXXLEKLEMVVKEMRHAGL 151
           VI SYFR+EAYERLD+FL+ I+  YKL RST+D           +EKL +++++M+ AG+
Sbjct: 365 VISSYFRQEAYERLDLFLEHIKSYYKLTRSTYDLLVAGYRRVGLMEKLNLLMEDMKLAGV 424


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