BLASTX nr result

ID: Scutellaria24_contig00022724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022724
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    58   2e-06
emb|CBI16098.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    56   6e-06
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]    56   6e-06
emb|CBI31649.3| unnamed protein product [Vitis vinifera]               56   8e-06

>ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
           distachyon]
          Length = 410

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/63 (46%), Positives = 32/63 (50%)
 Frame = +3

Query: 3   FAVGRFSXXXXXXXXXLPVVYTEMDGGFNNSGVPRRIXXXXXXXXXXXXXXXXXFMNSLF 182
           FAVGRF+         LPVVYTEMDGGFNN G PRRI                 F  ++F
Sbjct: 294 FAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGARQSQSTERSAIRRFFGNVF 353

Query: 183 GCF 191
            CF
Sbjct: 354 ACF 356


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 27/37 (72%)
 Frame = +3

Query: 3   FAVGRFSXXXXXXXXXLPVVYTEMDGGFNNSGVPRRI 113
           FAVGRFS         LPVVYTEMDGGFNNSG PRRI
Sbjct: 373 FAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRI 409


>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 388

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 27/37 (72%)
 Frame = +3

Query: 3   FAVGRFSXXXXXXXXXLPVVYTEMDGGFNNSGVPRRI 113
           FAVGRFS         LPVVYTEMDGGFNNSG PRRI
Sbjct: 272 FAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRI 308


>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
          Length = 1218

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 27/37 (72%)
 Frame = +3

Query: 3   FAVGRFSXXXXXXXXXLPVVYTEMDGGFNNSGVPRRI 113
           FAVGRFS         LPVVYTEMDGGFNNSG PRRI
Sbjct: 382 FAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRI 418


>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
          Length = 761

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 29/63 (46%), Positives = 30/63 (47%)
 Frame = +3

Query: 3   FAVGRFSXXXXXXXXXLPVVYTEMDGGFNNSGVPRRIXXXXXXXXXXXXXXXXXFMNSLF 182
           FAVGRFS         LPVVYTEMDGGFNN G PRRI                    +L 
Sbjct: 236 FAVGRFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGRMFRNLL 295

Query: 183 GCF 191
            CF
Sbjct: 296 ACF 298


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