BLASTX nr result

ID: Scutellaria24_contig00022710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022710
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]   104   8e-21
ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
ref|XP_002516576.1| pentatricopeptide repeat-containing protein,...    87   1e-15
ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13

>emb|CAN61515.1| hypothetical protein VITISV_033964 [Vitis vinifera]
          Length = 1331

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/118 (44%), Positives = 74/118 (62%)
 Frame = +3

Query: 6    RYFEEMMLEGLMPDESTFQDVLLMYCTQRSSDKVYQILKFMTNGGMKIDQFTCRKIVDLY 185
            R++EEMML G+MP+    +++L   C QRS  KV Q+LKFM +G  +I+     K++ LY
Sbjct: 1143 RFYEEMMLSGIMPBGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLY 1202

Query: 186  CEVRTVXXXXXXXXMMTKSNQTSDVLSLVHCSVIRVYAEKDRLDDVEYCVGRMLSRGI 359
             E  TV         +  SNQ+  VL  VHC +IR++A  DRLDD+EY VGRML +G+
Sbjct: 1203 FEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGM 1260


>ref|XP_002281582.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Vitis vinifera]
           gi|296081891|emb|CBI20896.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/118 (44%), Positives = 74/118 (62%)
 Frame = +3

Query: 6   RYFEEMMLEGLMPDESTFQDVLLMYCTQRSSDKVYQILKFMTNGGMKIDQFTCRKIVDLY 185
           R++EEMML G+MP+    +++L   C QRS  KV Q+LKFM +G  +I+     K++ LY
Sbjct: 232 RFYEEMMLSGIMPNGQILENILRGLCEQRSISKVEQLLKFMMDGEWEINVSMAEKLMGLY 291

Query: 186 CEVRTVXXXXXXXXMMTKSNQTSDVLSLVHCSVIRVYAEKDRLDDVEYCVGRMLSRGI 359
            E  TV         +  SNQ+  VL  VHC +IR++A  DRLDD+EY VGRML +G+
Sbjct: 292 FEHGTVEKMEELLLNLMNSNQSFAVLQQVHCGIIRMHAMLDRLDDMEYSVGRMLKQGM 349


>ref|XP_002516576.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544396|gb|EEF45917.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 416

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/118 (39%), Positives = 65/118 (55%)
 Frame = +3

Query: 6   RYFEEMMLEGLMPDESTFQDVLLMYCTQRSSDKVYQILKFMTNGGMKIDQFTCRKIVDLY 185
           R F+EMM  G+MP  +  + VL   C +R  D+V   L F+     + +     KIV+LY
Sbjct: 230 RLFDEMMSMGVMPSAAILEWVLEGLCKRRDCDRVRGFLNFLLECRFEFNGNMIEKIVELY 289

Query: 186 CEVRTVXXXXXXXXMMTKSNQTSDVLSLVHCSVIRVYAEKDRLDDVEYCVGRMLSRGI 359
            E+  V        +  + NQ  + LS +HC +IR YA+ DRLDDVEY VGRM S G+
Sbjct: 290 SELGKVDEMEKLLDICAEFNQVGETLSRLHCGIIRFYAKADRLDDVEYSVGRMTSSGM 347


>ref|XP_002309567.1| predicted protein [Populus trichocarpa] gi|222855543|gb|EEE93090.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/118 (38%), Positives = 66/118 (55%)
 Frame = +3

Query: 6   RYFEEMMLEGLMPDESTFQDVLLMYCTQRSSDKVYQILKFMTNGGMKIDQFTCRKIVDLY 185
           R +EEMM  G+MP     + VL  +C + S DKV + L F+     +I+      +V LY
Sbjct: 237 RLYEEMMSLGIMPSLHIMEWVLEGHCKRGSCDKVKEFLNFLLECKFEINGNMIENVVRLY 296

Query: 186 CEVRTVXXXXXXXXMMTKSNQTSDVLSLVHCSVIRVYAEKDRLDDVEYCVGRMLSRGI 359
            E+  V        M+ + NQ  + L  +HC +IR YA  D+LDDVE+ VGRM+S+G+
Sbjct: 297 SELGKVDEMEMLLEMLMEFNQVGEALLQLHCGIIRFYAMLDKLDDVEFSVGRMMSQGM 354


>ref|XP_003545589.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 421

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = +3

Query: 6   RYFEEMMLEGLMPDESTFQDVLLMYCTQRSSDKVYQILKFMTNGGMKIDQFTCRKIVDLY 185
           R FEEMM+ G++P  S  + +L   C Q+   +  +   F  + G +I++    K+V +Y
Sbjct: 232 RIFEEMMISGIVPSASIIESMLNGICKQKRLGRAEEFFTFAMDSGWEINENMVDKLVAMY 291

Query: 186 CEV-RTVXXXXXXXXMMTKSNQTSDVLSLVHCSVIRVYAEKDRLDDVEYCVGRMLSRGI 359
            ++ +          MM     T+ VL+ +HC ++++YA  DRLDD+E+ VGRML +G+
Sbjct: 292 LQLGKAEEMEGLLKTMMKPCVTTTGVLTRIHCGIVKMYAMVDRLDDIEFAVGRMLKQGL 350


Top