BLASTX nr result

ID: Scutellaria24_contig00022681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022681
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]...   203   1e-50
ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum ind...   203   1e-50
gb|AEK71667.1| hypothetical chloroplast RF1 [Antirrhinum majus]       203   1e-50
gb|ADD30902.1| putative RF1 protein [Antirrhinum majus]               203   1e-50
emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]         201   4e-50

>ref|YP_007353973.1| Ycf1 protein (chloroplast) [Tectona grandis]
           gi|438687662|emb|CCP47191.1| YCF1 protein (chloroplast)
           [Tectona grandis] gi|438688346|emb|CCP47280.1| YCF1
           protein (chloroplast) [Tectona grandis]
           gi|438688470|emb|CCP47369.1| YCF1 protein (chloroplast)
           [Tectona grandis]
          Length = 1898

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/137 (76%), Positives = 107/137 (78%)
 Frame = +3

Query: 3   GPSYLFLLRARVMEEGTEKRVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 182
           GPSYLFLLRA+VMEEGTEK+VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY
Sbjct: 78  GPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 137

Query: 183 LLXXXXXXXXXXXXDSGSTTRNSMRNFSIHCXXXXXXXXXXXXXXXXPSSMLARLVNIYM 362
           LL            D GSTTRNSMRNFSI C                PSSMLARLVNIYM
Sbjct: 138 LLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCLFLNNLIFQLFNHFILPSSMLARLVNIYM 197

Query: 363 FRCNNKMLFVTSSFVGW 413
           FRCNNKMLFVTSSFVGW
Sbjct: 198 FRCNNKMLFVTSSFVGW 214


>ref|YP_004935725.1| ycf1 gene product (chloroplast) [Sesamum indicum]
           gi|347448354|gb|AEO92765.1| ycf1 protein (chloroplast)
           [Sesamum indicum]
          Length = 1789

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/137 (76%), Positives = 107/137 (78%)
 Frame = +3

Query: 3   GPSYLFLLRARVMEEGTEKRVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 182
           GPSYLFLLRA+VMEEGTEK+VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY
Sbjct: 38  GPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 97

Query: 183 LLXXXXXXXXXXXXDSGSTTRNSMRNFSIHCXXXXXXXXXXXXXXXXPSSMLARLVNIYM 362
           LL            D GSTTRNSMRNFSI C                PSSMLARLVNIYM
Sbjct: 98  LLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYM 157

Query: 363 FRCNNKMLFVTSSFVGW 413
           FRCNNKMLFVTSSFVGW
Sbjct: 158 FRCNNKMLFVTSSFVGW 174


>gb|AEK71667.1| hypothetical chloroplast RF1 [Antirrhinum majus]
          Length = 336

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/137 (76%), Positives = 107/137 (78%)
 Frame = +3

Query: 3   GPSYLFLLRARVMEEGTEKRVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 182
           GPSYLFLLRA+VMEEGTEK+VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY
Sbjct: 38  GPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 97

Query: 183 LLXXXXXXXXXXXXDSGSTTRNSMRNFSIHCXXXXXXXXXXXXXXXXPSSMLARLVNIYM 362
           LL            D GSTTRNSMRNFSI C                PSSMLARLVNIYM
Sbjct: 98  LLFHFFWNNHKHFLDYGSTTRNSMRNFSIQCVFLNNLIFQLFNYFILPSSMLARLVNIYM 157

Query: 363 FRCNNKMLFVTSSFVGW 413
           FRCNNKMLFVTSSFVGW
Sbjct: 158 FRCNNKMLFVTSSFVGW 174


>gb|ADD30902.1| putative RF1 protein [Antirrhinum majus]
          Length = 1828

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/137 (76%), Positives = 107/137 (78%)
 Frame = +3

Query: 3   GPSYLFLLRARVMEEGTEKRVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 182
           GPSYLFLLRA+VMEEGTEK+VSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY
Sbjct: 38  GPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 97

Query: 183 LLXXXXXXXXXXXXDSGSTTRNSMRNFSIHCXXXXXXXXXXXXXXXXPSSMLARLVNIYM 362
           LL            D GSTTRNSMRNFSI C                PSSMLARLVNIYM
Sbjct: 98  LLFHFFWNNHKHFLDYGSTTRNSMRNFSIQCVFLNNLIFQLFNYFILPSSMLARLVNIYM 157

Query: 363 FRCNNKMLFVTSSFVGW 413
           FRCNNKMLFVTSSFVGW
Sbjct: 158 FRCNNKMLFVTSSFVGW 174


>emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]
          Length = 1876

 Score =  201 bits (512), Expect = 4e-50
 Identities = 104/137 (75%), Positives = 106/137 (77%)
 Frame = +3

Query: 3   GPSYLFLLRARVMEEGTEKRVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLALPY 182
           GPSYLFLLRA+VMEEGTEK+VSATTGFITGQLMMFISIYYAPLHLALGRPHTIT LALPY
Sbjct: 38  GPSYLFLLRAQVMEEGTEKKVSATTGFITGQLMMFISIYYAPLHLALGRPHTITALALPY 97

Query: 183 LLXXXXXXXXXXXXDSGSTTRNSMRNFSIHCXXXXXXXXXXXXXXXXPSSMLARLVNIYM 362
           LL            D GSTTRNSMRNFSI C                PSSMLARLVNIYM
Sbjct: 98  LLFHFFWNNHKHFFDYGSTTRNSMRNFSIQCVFLNNLIFQLFNHFILPSSMLARLVNIYM 157

Query: 363 FRCNNKMLFVTSSFVGW 413
           FRCNNKMLFVTSSFVGW
Sbjct: 158 FRCNNKMLFVTSSFVGW 174


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