BLASTX nr result

ID: Scutellaria24_contig00022477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022477
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...   191   5e-47
sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related prote...    92   6e-17
ref|XP_003627961.1| Retinoblastoma-related protein [Medicago tru...    90   2e-16
sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related prote...    90   2e-16
sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related prote...    90   2e-16

>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
           gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
           baicalensis]
          Length = 1006

 Score =  191 bits (485), Expect = 5e-47
 Identities = 94/94 (100%), Positives = 94/94 (100%)
 Frame = +3

Query: 123 MTELKKIPSPSHPADEGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVP 302
           MTELKKIPSPSHPADEGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVP
Sbjct: 1   MTELKKIPSPSHPADEGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVP 60

Query: 303 ALGTGTLDEAERYWFAFVLYSVRKLSENGDSVEK 404
           ALGTGTLDEAERYWFAFVLYSVRKLSENGDSVEK
Sbjct: 61  ALGTGTLDEAERYWFAFVLYSVRKLSENGDSVEK 94


>sp|B1ABR6.1|RBR_HIEPI RecName: Full=Retinoblastoma-related protein
           gi|167593883|gb|ABZ85628.1| retinoblastoma-related
           protein [Hieracium piloselloides]
          Length = 1005

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = +3

Query: 123 MTELKKI-PSPSHPADEGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANV 299
           M +L+ I P+   P + G  TIEARF++F K  L +DD+  L +A KL ++SKHL M N 
Sbjct: 1   MEDLQPINPNTDSPTETGATTIEARFSYFCKGRLTMDDNA-LEEAMKLFNQSKHLFMTNA 59

Query: 300 PALGTGTLDEAERYWFAFVLYSVRKLSENGDS 395
            ALG+GT +EAE YWFAF+L+S+++LS+  D+
Sbjct: 60  SALGSGTPEEAEHYWFAFILFSMKRLSKKNDA 91


>ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
           gi|355521983|gb|AET02437.1| Retinoblastoma-related
           protein [Medicago truncatula]
          Length = 1052

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = +3

Query: 168 EGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVPALGTGTLDEAERYWF 347
           E G+   +RFA FSKN+L LD+ K   +A  L  E+KHLLMANV ++G GT++EAERYWF
Sbjct: 18  ENGDQAVSRFAEFSKNELALDE-KSCKEAMDLFGETKHLLMANVSSMGNGTIEEAERYWF 76

Query: 348 AFVLYSVRKLSENGDSVEK 404
           AF+LYS+++L++  +  EK
Sbjct: 77  AFILYSIKRLTQKNEESEK 95


>sp|B1ABS0.1|RBR_HIEPL RecName: Full=Retinoblastoma-related protein
           gi|167593891|gb|ABZ85632.1| retinoblastoma-related
           protein [Hieracium pilosella]
          Length = 1008

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
 Frame = +3

Query: 123 MTELKKI-PSPSHPADEGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANV 299
           M +L+ I P+   P + G  TIEARF+ F K  L +DD+  L +A KL ++SKHL M N 
Sbjct: 1   MEDLQPINPNTDSPTETGATTIEARFSDFCKGRLTMDDNA-LEEAMKLFNQSKHLFMTNA 59

Query: 300 PALGTGTLDEAERYWFAFVLYSVRKLSENGD 392
            ALG+GT +EAE YWFAF+L+S+++LS+  D
Sbjct: 60  SALGSGTPEEAEHYWFAFILFSMKRLSKKND 90


>sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
           gi|62956049|gb|AAY23367.1| retinoblastoma-related
           protein [Medicago sativa]
          Length = 1025

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = +3

Query: 168 EGGNTIEARFAHFSKNDLRLDDDKFLAQATKLLDESKHLLMANVPALGTGTLDEAERYWF 347
           E G+   +RFA FSKN+L LD+ K   +A  L  E+KHLLMANV ++G GT++EAERYWF
Sbjct: 18  ENGDQAVSRFAEFSKNELALDE-KSCKEAMDLFGETKHLLMANVSSMGNGTIEEAERYWF 76

Query: 348 AFVLYSVRKLSENGDSVEK 404
           AF+LYS+++L++  +  EK
Sbjct: 77  AFILYSIKRLTQKNEESEK 95


Top