BLASTX nr result

ID: Scutellaria24_contig00022423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022423
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   186   2e-45
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   181   7e-44
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   165   3e-39
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   165   3e-39

>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  186 bits (471), Expect = 2e-45
 Identities = 85/135 (62%), Positives = 116/135 (85%)
 Frame = -2

Query: 414  LGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSHV 235
            LG+TT+Y+SA Q SG EI+SQP+K+EVYAP R+HP DIFLV G+SYVLTV+GGP IG +V
Sbjct: 1117 LGITTLYVSAKQQSGHEILSQPIKIEVYAPLRVHPQDIFLVPGSSYVLTVKGGPTIGVYV 1176

Query: 234  QYSSLDGQTAQIHKFSGRLLAISPGNSTLVATIFGDGDIMLCRAFGIVKVGIPSSAVLNV 55
            +Y+SLD   A + + SG+L  ISPGN+T+++T++G+GD+++C+A+G VKVG+PSSA+LNV
Sbjct: 1177 EYASLDDGIATVDRSSGQLSGISPGNTTILSTVYGNGDVVICQAYGDVKVGVPSSAMLNV 1236

Query: 54   QSEQLAVDRSMPIYP 10
            QSEQL V R++PIYP
Sbjct: 1237 QSEQLDVGRNVPIYP 1251


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/137 (64%), Positives = 110/137 (80%)
 Frame = -2

Query: 414  LGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSHV 235
            LGVT +Y+SA Q SG EI S  +KVEVYAPPRIHP DIFLV GA+YVL V+GGP+IG  +
Sbjct: 1203 LGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGVVI 1262

Query: 234  QYSSLDGQTAQIHKFSGRLLAISPGNSTLVATIFGDGDIMLCRAFGIVKVGIPSSAVLNV 55
            +Y+SLD + A ++K SGRL AISPGNSTLVAT++G GD ++C+A+G +KVG+PS   LNV
Sbjct: 1263 EYASLDDRIATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYGRIKVGVPSLVTLNV 1322

Query: 54   QSEQLAVDRSMPIYPFL 4
            QSEQL V R MPI+P L
Sbjct: 1323 QSEQLDVGREMPIFPSL 1339


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/137 (64%), Positives = 110/137 (80%)
 Frame = -2

Query: 414  LGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSHV 235
            LGVT +Y+SA Q SG EI S  +KVEVYAPPRIHP DIFLV GA+YVL V+GGP+IG  +
Sbjct: 1128 LGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGVVI 1187

Query: 234  QYSSLDGQTAQIHKFSGRLLAISPGNSTLVATIFGDGDIMLCRAFGIVKVGIPSSAVLNV 55
            +Y+SLD + A ++K SGRL AISPGNSTLVAT++G GD ++C+A+G +KVG+PS   LNV
Sbjct: 1188 EYASLDDRIATVNKSSGRLSAISPGNSTLVATVYGKGDTVICQAYGRIKVGVPSLVTLNV 1247

Query: 54   QSEQLAVDRSMPIYPFL 4
            QSEQL V R MPI+P L
Sbjct: 1248 QSEQLDVGREMPIFPSL 1264


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
            sativus]
          Length = 1758

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/135 (56%), Positives = 101/135 (74%)
 Frame = -2

Query: 414  LGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSHV 235
            LG TT+Y+S +Q SGREI+S+P+ +EVYA PR+HP  IFL+ GASY LTV GGP +G++V
Sbjct: 1110 LGTTTLYVSILQQSGREILSEPITIEVYALPRVHPHSIFLLPGASYTLTVEGGPTVGTYV 1169

Query: 234  QYSSLDGQTAQIHKFSGRLLAISPGNSTLVATIFGDGDIMLCRAFGIVKVGIPSSAVLNV 55
            +++SLD     +HK SG LLA+S G S + AT F  G  M+CR +G ++VGIPS+ +LNV
Sbjct: 1170 EFASLDNAIVNVHKSSGLLLAVSSGKSNISATFFRYGGSMICRTYGSIRVGIPSNVLLNV 1229

Query: 54   QSEQLAVDRSMPIYP 10
            Q+EQL V   MPIYP
Sbjct: 1230 QNEQLGVGNEMPIYP 1244


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  165 bits (418), Expect = 3e-39
 Identities = 76/135 (56%), Positives = 101/135 (74%)
 Frame = -2

Query: 414  LGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSHV 235
            LG TT+Y+S +Q SGREI+S+P+ +EVYA PR+HP  IFL+ GASY LTV GGP +G++V
Sbjct: 1110 LGTTTLYVSILQQSGREILSEPITIEVYALPRVHPHSIFLLPGASYTLTVEGGPTVGTYV 1169

Query: 234  QYSSLDGQTAQIHKFSGRLLAISPGNSTLVATIFGDGDIMLCRAFGIVKVGIPSSAVLNV 55
            +++SLD     +HK SG LLA+S G S + AT F  G  M+CR +G ++VGIPS+ +LNV
Sbjct: 1170 EFASLDNAIVNVHKSSGLLLAVSSGKSNISATFFRYGGSMICRTYGSIRVGIPSNVLLNV 1229

Query: 54   QSEQLAVDRSMPIYP 10
            Q+EQL V   MPIYP
Sbjct: 1230 QNEQLGVGNEMPIYP 1244


Top