BLASTX nr result

ID: Scutellaria24_contig00022418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022418
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec...   376   e-102
ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu...   372   e-100
ref|XP_002301627.1| glutamate-gated kainate-type ion channel rec...   362   1e-97
ref|XP_004151932.1| PREDICTED: glutamate receptor 3.4-like [Cucu...   349   7e-94
ref|XP_004171803.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re...   347   3e-93

>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222861896|gb|EEE99438.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 927

 Score =  376 bits (965), Expect = e-102
 Identities = 185/273 (67%), Positives = 224/273 (82%)
 Frame = -1

Query: 1248 QLITVFWFSFSTMFFSHRENTVSTLGRSXXXXXXXXXLIINSSYTASLTSILTVQQLSSR 1069
            Q++T+FWFSFSTMFFSHRENTVSTLGR          LIINSSYTASLTSILTVQQL+SR
Sbjct: 621  QIMTIFWFSFSTMFFSHRENTVSTLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLTSR 680

Query: 1068 VQGIDSLVTSSDPIGIQDGSFSYEYLVNDLNISPSRLRVIKTQEEYIRVLQLGPDNGGVG 889
            ++GIDSLV+S++PIGIQDGSF+  YL+++LNI+ SRL ++K+Q+EY   LQLGP NGGV 
Sbjct: 681  IEGIDSLVSSNEPIGIQDGSFARNYLMDELNIAGSRLVILKSQQEYSTALQLGPKNGGVA 740

Query: 888  AIVDELPYVELFLSTTKCQFSVVGREFTKSGWGFVFQRDAPLAVDLSTAILQLSENGDLQ 709
            AIVDELPY+ELFLS+T C+F  VG+EFTKSGWGF FQRD+PLAVDLSTAILQLSENGDLQ
Sbjct: 741  AIVDELPYIELFLSSTSCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQ 800

Query: 708  RIHDKWLSKGLCSVQTNPIDDNRLSLKSFWGLFLICGTACFIALAIFFCRICWQFSKYST 529
            +IH+KWL+ G C  Q N IDD+RLSL SFWGLFLICG +CFIAL  F C++ +QF +++ 
Sbjct: 801  KIHNKWLTHGDCMEQINEIDDSRLSLTSFWGLFLICGISCFIALTTFCCKVIFQFRRFTP 860

Query: 528  ESEHHEDVETAQPTRPSSKRTLRSASFKDLIEF 430
            E     +V+  QP RP  +R+L S SFKDLI+F
Sbjct: 861  EGGEEAEVDEIQPGRP--RRSLHSTSFKDLIDF 891


>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 938

 Score =  372 bits (954), Expect = e-100
 Identities = 186/300 (62%), Positives = 225/300 (75%)
 Frame = -1

Query: 1248 QLITVFWFSFSTMFFSHRENTVSTLGRSXXXXXXXXXLIINSSYTASLTSILTVQQLSSR 1069
            QLIT+FWFSFSTMFFSHRENTVS LGR          LIINSSYTASLTSILTVQQL+SR
Sbjct: 631  QLITIFWFSFSTMFFSHRENTVSALGRFVLLIWLFVVLIINSSYTASLTSILTVQQLTSR 690

Query: 1068 VQGIDSLVTSSDPIGIQDGSFSYEYLVNDLNISPSRLRVIKTQEEYIRVLQLGPDNGGVG 889
            ++GIDSL++S++PIG+Q+GSF+  YLV++LNI+ SRL +++ QE Y+  LQ GP  GGV 
Sbjct: 691  IEGIDSLISSTEPIGVQEGSFALNYLVDELNIAQSRLVILRNQEHYLTALQRGPKGGGVA 750

Query: 888  AIVDELPYVELFLSTTKCQFSVVGREFTKSGWGFVFQRDAPLAVDLSTAILQLSENGDLQ 709
            AIVDELPYVELFLS T C F  VG+EFTKSGWGF FQRD+PLA+DLSTAILQLSENGDLQ
Sbjct: 751  AIVDELPYVELFLSNTNCAFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQ 810

Query: 708  RIHDKWLSKGLCSVQTNPIDDNRLSLKSFWGLFLICGTACFIALAIFFCRICWQFSKYST 529
            +IH+KWL++  CS+Q   +D +RLSL SFWGLFLICG AC IAL +FFCR+  QF ++S 
Sbjct: 811  KIHNKWLTRTECSMQIGQVDADRLSLSSFWGLFLICGLACCIALTLFFCRVFGQFRRFSP 870

Query: 528  ESEHHEDVETAQPTRPSSKRTLRSASFKDLIEFXXXXXXXXXXXXXXKSGSSKRHPGQIP 349
            E     +VE  +P RP  +R+LRS SFKDL++F              KS  +KR     P
Sbjct: 871  EEVEEREVEEIEPARP--RRSLRSTSFKDLLDFVDKKEAEIKEMLKRKSSDNKRQASPSP 928


>ref|XP_002301627.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222843353|gb|EEE80900.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 956

 Score =  362 bits (928), Expect = 1e-97
 Identities = 178/273 (65%), Positives = 216/273 (79%)
 Frame = -1

Query: 1248 QLITVFWFSFSTMFFSHRENTVSTLGRSXXXXXXXXXLIINSSYTASLTSILTVQQLSSR 1069
            QL+T+FWFSFSTMFFSHRENT+STLGR          LIINSSYTASLTSILTVQQL+SR
Sbjct: 651  QLMTIFWFSFSTMFFSHRENTLSTLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLTSR 710

Query: 1068 VQGIDSLVTSSDPIGIQDGSFSYEYLVNDLNISPSRLRVIKTQEEYIRVLQLGPDNGGVG 889
            ++GIDSL   ++PIG+QDGSF+  YL+++LNI+ SRL ++K+QEEY   LQLGP+ GGV 
Sbjct: 711  IEGIDSLAAGNEPIGVQDGSFARNYLIDELNIAESRLVILKSQEEYSTFLQLGPNRGGVA 770

Query: 888  AIVDELPYVELFLSTTKCQFSVVGREFTKSGWGFVFQRDAPLAVDLSTAILQLSENGDLQ 709
            AIVDELPY+ELFLS + C F +VG+EFTKSGWGF FQRD+PLAVDLSTAILQLSENGDLQ
Sbjct: 771  AIVDELPYIELFLSASNCAFKIVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQ 830

Query: 708  RIHDKWLSKGLCSVQTNPIDDNRLSLKSFWGLFLICGTACFIALAIFFCRICWQFSKYST 529
            +IH+KWL+   CS Q N ID+N LSLKSFWGLFLICG AC I+L +FFC I  Q+ +++ 
Sbjct: 831  KIHNKWLTHADCSAQGNEIDENHLSLKSFWGLFLICGIACSISLVVFFCNIICQYRRFTP 890

Query: 528  ESEHHEDVETAQPTRPSSKRTLRSASFKDLIEF 430
            E     +V+  QP RP  +R++ S S K LI F
Sbjct: 891  EDGEEAEVDEIQPPRP--QRSVCSTSLKKLIGF 921


>ref|XP_004151932.1| PREDICTED: glutamate receptor 3.4-like [Cucumis sativus]
          Length = 935

 Score =  349 bits (896), Expect = 7e-94
 Identities = 171/272 (62%), Positives = 216/272 (79%)
 Frame = -1

Query: 1248 QLITVFWFSFSTMFFSHRENTVSTLGRSXXXXXXXXXLIINSSYTASLTSILTVQQLSSR 1069
            QLIT+FWFSFSTMFFSH+ENTVSTLGR          LIINSSYTASLTSILTVQQL+S+
Sbjct: 637  QLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSK 696

Query: 1068 VQGIDSLVTSSDPIGIQDGSFSYEYLVNDLNISPSRLRVIKTQEEYIRVLQLGPDNGGVG 889
            ++GIDSL++ +D IG+Q+GSF+  YL++DL ++ SR+  +K QEEY   L+ GP+NGGV 
Sbjct: 697  IKGIDSLISRTDVIGVQEGSFALHYLIDDLGVAASRIIKLKDQEEYADALRRGPENGGVA 756

Query: 888  AIVDELPYVELFLSTTKCQFSVVGREFTKSGWGFVFQRDAPLAVDLSTAILQLSENGDLQ 709
            AIVDELPYVELFL+ T C + +VG EFTKSGWGF FQRD+PLAVDLSTAILQLSENGDLQ
Sbjct: 757  AIVDELPYVELFLAGTNCMYRIVGEEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQ 816

Query: 708  RIHDKWLSKGLCSVQTNPIDDNRLSLKSFWGLFLICGTACFIALAIFFCRICWQFSKYST 529
            +IHDKWLS+  CS   N +D N+LSL SFWGLFLICG ACFIAL++FF R+ +Q+ +++ 
Sbjct: 817  KIHDKWLSRTECSTDLNQVDVNQLSLSSFWGLFLICGIACFIALSVFFFRVLFQYRRFTP 876

Query: 528  ESEHHEDVETAQPTRPSSKRTLRSASFKDLIE 433
            E++   DVE  +P R  ++R  R+ SF + ++
Sbjct: 877  ETQ--SDVEDIEPVR--TRRLSRTTSFMNFVD 904


>ref|XP_004171803.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 3.4-like [Cucumis
            sativus]
          Length = 935

 Score =  347 bits (891), Expect = 3e-93
 Identities = 170/272 (62%), Positives = 215/272 (79%)
 Frame = -1

Query: 1248 QLITVFWFSFSTMFFSHRENTVSTLGRSXXXXXXXXXLIINSSYTASLTSILTVQQLSSR 1069
            QLIT+FWFSFSTMFFSH+ENTVSTLGR          LIINSSYT SLTSILTVQQL+S+
Sbjct: 637  QLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTXSLTSILTVQQLTSK 696

Query: 1068 VQGIDSLVTSSDPIGIQDGSFSYEYLVNDLNISPSRLRVIKTQEEYIRVLQLGPDNGGVG 889
            ++GIDSL++ +D IG+Q+GSF+  YL++DL ++ SR+  +K QEEY   L+ GP+NGGV 
Sbjct: 697  IKGIDSLISRTDVIGVQEGSFALHYLIDDLGVAASRIIKLKDQEEYADALRRGPENGGVA 756

Query: 888  AIVDELPYVELFLSTTKCQFSVVGREFTKSGWGFVFQRDAPLAVDLSTAILQLSENGDLQ 709
            AIVDELPYVELFL+ T C + +VG EFTKSGWGF FQRD+PLAVDLSTAILQLSENGDLQ
Sbjct: 757  AIVDELPYVELFLAGTNCMYRIVGEEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQ 816

Query: 708  RIHDKWLSKGLCSVQTNPIDDNRLSLKSFWGLFLICGTACFIALAIFFCRICWQFSKYST 529
            +IHDKWLS+  CS   N +D N+LSL SFWGLFLICG ACFIAL++FF R+ +Q+ +++ 
Sbjct: 817  KIHDKWLSRTECSTDLNQVDVNQLSLSSFWGLFLICGIACFIALSVFFFRVLFQYRRFTP 876

Query: 528  ESEHHEDVETAQPTRPSSKRTLRSASFKDLIE 433
            E++   DVE  +P R  ++R  R+ SF + ++
Sbjct: 877  ETQ--SDVEDIEPVR--TRRLSRTTSFMNFVD 904


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