BLASTX nr result
ID: Scutellaria24_contig00022405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00022405
(547 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-... 295 2e-82
ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|2... 294 3e-81
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [... 290 1e-80
ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-... 284 2e-79
emb|CBI15355.3| unnamed protein product [Vitis vinifera] 284 2e-79
>ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max]
Length = 525
Score = 295 bits (754), Expect(2) = 2e-82
Identities = 135/165 (81%), Positives = 152/165 (92%)
Frame = +3
Query: 51 EKTMEKLEIILSGYEKEDVVPSLFVFMGNFCSRPCNISFNSYSSIRSQFGKLGIMVAAHQ 230
E+T++KLE++L G+EKE VVPSLFVFMGNF S+PCN+SF+ YSS+R QFGKLG M+AAH
Sbjct: 293 EETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHT 352
Query: 231 RLKEHSRFVFIPGPDDIGPSNVLPRCSLPKYITEEFQNHIPNAVFLSNPCRIKFYTQEIV 410
RLKEHS+F+FIPGPDD GPSNVLPRC+LPKY+TEE Q HIPNA+F SNPCR+KFYTQEIV
Sbjct: 353 RLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIV 412
Query: 411 FFRQDMLYRMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPL 545
FFRQDMLYRMRRSCLMPPSTEET D FEHLVATITHQSHLCPLPL
Sbjct: 413 FFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPL 457
Score = 37.0 bits (84), Expect(2) = 2e-82
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 1 VNDMFVILSDAWLDNEE 51
VNDMF+ILSD WLDNEE
Sbjct: 278 VNDMFIILSDIWLDNEE 294
>ref|XP_002318325.1| predicted protein [Populus trichocarpa] gi|222858998|gb|EEE96545.1|
predicted protein [Populus trichocarpa]
Length = 518
Score = 294 bits (753), Expect(2) = 3e-81
Identities = 133/165 (80%), Positives = 149/165 (90%)
Frame = +3
Query: 51 EKTMEKLEIILSGYEKEDVVPSLFVFMGNFCSRPCNISFNSYSSIRSQFGKLGIMVAAHQ 230
E+ M KLE +L G+E ++VVPSLFVFMGNFCS PCN+SF+S+SS+RSQFGKLG M+ AHQ
Sbjct: 287 EEAMGKLETVLDGFESQEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQMIGAHQ 346
Query: 231 RLKEHSRFVFIPGPDDIGPSNVLPRCSLPKYITEEFQNHIPNAVFLSNPCRIKFYTQEIV 410
RLKEHSRF+FIPGP+D GPS VLPRC LPKY+TEE Q HIPNA+F SNPCR+KFYTQEIV
Sbjct: 347 RLKEHSRFMFIPGPEDAGPSTVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKFYTQEIV 406
Query: 411 FFRQDMLYRMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPL 545
FFR D+LYRMRRSCLMPPSTEET DPFEHLVATITHQSHLCPLPL
Sbjct: 407 FFRHDLLYRMRRSCLMPPSTEETDDPFEHLVATITHQSHLCPLPL 451
Score = 33.1 bits (74), Expect(2) = 3e-81
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 1 VNDMFVILSDAWLDNEE 51
+NDMFVILSD W+D+EE
Sbjct: 272 LNDMFVILSDIWVDSEE 288
>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
subunit B, putative [Ricinus communis]
Length = 536
Score = 290 bits (742), Expect(2) = 1e-80
Identities = 130/165 (78%), Positives = 151/165 (91%)
Frame = +3
Query: 51 EKTMEKLEIILSGYEKEDVVPSLFVFMGNFCSRPCNISFNSYSSIRSQFGKLGIMVAAHQ 230
E+ M KLE++L G+E ++VVPSLFVFMGNFCS PCN+SF+S+S++R QFGKLG M+AAHQ
Sbjct: 305 EEAMGKLEMVLDGFEIQEVVPSLFVFMGNFCSHPCNLSFHSFSTLRLQFGKLGKMIAAHQ 364
Query: 231 RLKEHSRFVFIPGPDDIGPSNVLPRCSLPKYITEEFQNHIPNAVFLSNPCRIKFYTQEIV 410
RLKEHSRF+FIPGPDD GPS VLPRC+LPKY+TE+ Q HIPNA+F +NPCR+KFYTQEIV
Sbjct: 365 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKFYTQEIV 424
Query: 411 FFRQDMLYRMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPL 545
FFR D+LYRM RSCLMPPSTEET+DPFEHLVATITHQSHLCPLPL
Sbjct: 425 FFRHDLLYRMHRSCLMPPSTEETADPFEHLVATITHQSHLCPLPL 469
Score = 35.4 bits (80), Expect(2) = 1e-80
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 1 VNDMFVILSDAWLDNEE 51
VNDMFVILSD WLD+EE
Sbjct: 290 VNDMFVILSDIWLDSEE 306
>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
Length = 527
Score = 284 bits (726), Expect(2) = 2e-79
Identities = 129/165 (78%), Positives = 148/165 (89%)
Frame = +3
Query: 51 EKTMEKLEIILSGYEKEDVVPSLFVFMGNFCSRPCNISFNSYSSIRSQFGKLGIMVAAHQ 230
E+TM KL +L GYE +VVPSLF+FMGNFCS PCN+SF+S+SS+R QFGKLG M+A+H
Sbjct: 296 EETMGKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHP 355
Query: 231 RLKEHSRFVFIPGPDDIGPSNVLPRCSLPKYITEEFQNHIPNAVFLSNPCRIKFYTQEIV 410
RLKEHS+F+FIPGPDD GPS VLPRC+LP Y+TEEF+ +IPNA+F SNPCRIKFYTQEIV
Sbjct: 356 RLKEHSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIV 415
Query: 411 FFRQDMLYRMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPL 545
FRQD+LYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPL
Sbjct: 416 LFRQDLLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPL 460
Score = 37.7 bits (86), Expect(2) = 2e-79
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 VNDMFVILSDAWLDNEE 51
VNDMFVILSD WLDNEE
Sbjct: 281 VNDMFVILSDVWLDNEE 297
>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 284 bits (726), Expect(2) = 2e-79
Identities = 129/165 (78%), Positives = 148/165 (89%)
Frame = +3
Query: 51 EKTMEKLEIILSGYEKEDVVPSLFVFMGNFCSRPCNISFNSYSSIRSQFGKLGIMVAAHQ 230
E+TM KL +L GYE +VVPSLF+FMGNFCS PCN+SF+S+SS+R QFGKLG M+A+H
Sbjct: 296 EETMGKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHP 355
Query: 231 RLKEHSRFVFIPGPDDIGPSNVLPRCSLPKYITEEFQNHIPNAVFLSNPCRIKFYTQEIV 410
RLKEHS+F+FIPGPDD GPS VLPRC+LP Y+TEEF+ +IPNA+F SNPCRIKFYTQEIV
Sbjct: 356 RLKEHSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIV 415
Query: 411 FFRQDMLYRMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPL 545
FRQD+LYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPL
Sbjct: 416 LFRQDLLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPL 460
Score = 37.7 bits (86), Expect(2) = 2e-79
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 1 VNDMFVILSDAWLDNEE 51
VNDMFVILSD WLDNEE
Sbjct: 281 VNDMFVILSDVWLDNEE 297