BLASTX nr result

ID: Scutellaria24_contig00022108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022108
         (1485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   496   e-138
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   475   e-131
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   469   e-130
ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818...   455   e-125
ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [S...   414   e-113

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
            gi|298205172|emb|CBI17231.3| unnamed protein product
            [Vitis vinifera]
          Length = 463

 Score =  496 bits (1277), Expect = e-138
 Identities = 262/426 (61%), Positives = 313/426 (73%), Gaps = 19/426 (4%)
 Frame = +2

Query: 2    DTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNEVTAYQAQRQLHGLRFLGKVLSVERAS 181
            DTL+RLFS YGASSVRPC+ GR++NCAFVDFK+E+ A QA RQL+GLRFLGKVL VERA+
Sbjct: 35   DTLSRLFSSYGASSVRPCTSGRLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERAN 94

Query: 182  KVIQDPKQQQSE---RDFKKDVTLVKDAFVPKG------STGVYASEPVAEKLGVDYPFP 334
            K  +D KQ+      +D  K V+L+KD  + +       S+ + ASEP+A +LG+DYPFP
Sbjct: 95   KPTEDDKQKSEALFGKDLTKPVSLIKDFTMARDLDEGLKSSSLPASEPIAARLGIDYPFP 154

Query: 335  PYLEYAYPPPDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRKALXXXXXXXXXXX 514
            P+LEYAYPPPDG+ILTNIVNALIAVPRFY QVLHLMNKMNIPAPFR AL           
Sbjct: 155  PHLEYAYPPPDGNILTNIVNALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPLPPPVPA 214

Query: 515  XXXXXXXXXXXX-NMKNXXXXXXXXXXXXXXVG---------QEARPKRKRVKRHAIVGP 664
                         N+++              V          +E +P RKRVKR AIVGP
Sbjct: 215  PPPPPPPPEAARPNLEDLSSGESEMESSDEEVDGNAYSTGPPRETKPGRKRVKREAIVGP 274

Query: 665  AVDKDVAHEAVGLKQVALVPKEMPIIKKNNPILQIKLANKQVEPEPKDAAAGKELQESNP 844
             VDKDVAHEAVG+K   LVPKE+P+IKK NP+LQIK+  K +     + +  KE ++S  
Sbjct: 275  GVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVITEHKDECSIMKESEDSEK 334

Query: 845  ENSVREPFASLEDLNSGKMPPEEILSLPRFKNYTAGDPTPVLYIKNLAKDVVVDDFYFIF 1024
            E+   +P+A+LE+L SGK+PPEEILSLP FKNYTAG+P PVLYIKNLAKDVVVDDFYFIF
Sbjct: 335  EDFDLKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVVVDDFYFIF 394

Query: 1025 GSLFGSIDAVKSNLTVKLMQEGRMRGQAFVTFPTVELARNALNAVNGYVFKGKPIVIQFG 1204
            GSLFGS+DA KS L+VKLMQEGRMRGQAFVTFP+VELA +ALN VNGYVFKGKP++IQFG
Sbjct: 395  GSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYVFKGKPMIIQFG 454

Query: 1205 RSPAAA 1222
            R+PAAA
Sbjct: 455  RNPAAA 460


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
            vinifera]
          Length = 463

 Score =  475 bits (1222), Expect = e-131
 Identities = 258/427 (60%), Positives = 308/427 (72%), Gaps = 20/427 (4%)
 Frame = +2

Query: 2    DTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNEVTAYQAQRQLHGLRFLGKVLSVERAS 181
            DTL+RLFS YGASSVRP + GR++NCAFVDFK+E+ A QA RQL+GLRFLGKVL VERA+
Sbjct: 35   DTLSRLFSSYGASSVRPSTSGRLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERAN 94

Query: 182  KVIQDPKQQQSERDFKKDVT----LVKDAFVPKG------STGVYASEPVAEKLGVDYPF 331
            K  +D KQ+ SE  F KD+T    L+KD  + +       S+ + ASEP+A +LG+DYPF
Sbjct: 95   KPTEDDKQK-SEALFGKDLTKPASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPF 153

Query: 332  PPYLEYAYPPPDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRKALXXXXXXXXXX 511
            PP+LEY    PDG+ILTNIVNALIAVPRFY QVLHLMNKMNIPAPFR AL          
Sbjct: 154  PPHLEYVXSHPDGNILTNIVNALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPIPPPVP 213

Query: 512  XXXXXXXXXXXXX-NMKNXXXXXXXXXXXXXXVG---------QEARPKRKRVKRHAIVG 661
                          N+++              V          +E +P RKRVKR AI G
Sbjct: 214  APPTPPPPPEAARPNLEDLSSGESEMESSDEEVDGKAYSPGPPRETKPGRKRVKREAIAG 273

Query: 662  PAVDKDVAHEAVGLKQVALVPKEMPIIKKNNPILQIKLANKQVEPEPKDAAAGKELQESN 841
            P VDKDVAHEAVG+K   LVPKE+P+IKK NP+LQIK+A K +     + +  KE ++S 
Sbjct: 274  PGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSE 333

Query: 842  PENSVREPFASLEDLNSGKMPPEEILSLPRFKNYTAGDPTPVLYIKNLAKDVVVDDFYFI 1021
             E+   + +A+LE+L SGK+PPEEILSLP FKNY AG+P PVLYIKNLAKDVVVDDFYFI
Sbjct: 334  KEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFI 393

Query: 1022 FGSLFGSIDAVKSNLTVKLMQEGRMRGQAFVTFPTVELARNALNAVNGYVFKGKPIVIQF 1201
            FGSLFGS+DA KS L+VKLMQEGRMRGQAFVTFP+VELA +ALN VNGYVFKGKP++IQF
Sbjct: 394  FGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKPMIIQF 453

Query: 1202 GRSPAAA 1222
            GR+PAAA
Sbjct: 454  GRNPAAA 460


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
            gi|223535277|gb|EEF36954.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 450

 Score =  469 bits (1207), Expect = e-130
 Identities = 252/425 (59%), Positives = 301/425 (70%), Gaps = 18/425 (4%)
 Frame = +2

Query: 2    DTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNEVTAYQAQRQLHGLRFLGKVLSVERAS 181
            +TL+RLFSHYGA+SVRPC+ GR+ NCAFVDFKNE  AYQAQRQL+GLRFLGKVL+ E+A+
Sbjct: 23   ETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNEALAYQAQRQLNGLRFLGKVLAAEKAN 82

Query: 182  --KVIQDPKQQQSERDFKKDVTLV----KDAFVPKGSTG----VYASEPVAEKLGVDYPF 331
              K  ++    QSE   +KD TL     KDA     + G    V ASEP+A +LGVDYPF
Sbjct: 83   NNKPNENNVLTQSEAQIRKDHTLPTSVDKDASAMIDTDGRSKSVPASEPIAPRLGVDYPF 142

Query: 332  PPYLEYAYPPPDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRKALXXXXXXXXXX 511
            PP+LEY YPPPDG+ILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFR AL          
Sbjct: 143  PPHLEYTYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSAP 202

Query: 512  XXXXXXXXXXXXX--------NMKNXXXXXXXXXXXXXXVGQEARPKRKRVKRHAIVGPA 667
                                 +                 V +E + +RKRV++ AIVGP 
Sbjct: 203  PPPPPPPPTVAGKPHLADLSSSEAEMESSDEDIDNKTHPVSREIKSRRKRVRQEAIVGPG 262

Query: 668  VDKDVAHEAVGLKQVALVPKEMPIIKKNNPILQIKLANKQVEPEPKDAAAGKELQESNPE 847
            VDKDV HEAVGLK  +LVPKE+P+IKK NP+LQIK+A K  + E  D  + KE  E + E
Sbjct: 263  VDKDVVHEAVGLKPSSLVPKEIPVIKKKNPVLQIKIAPKVSQTEQTDDISMKESDEQDEE 322

Query: 848  NSVREPFASLEDLNSGKMPPEEILSLPRFKNYTAGDPTPVLYIKNLAKDVVVDDFYFIFG 1027
                +PFA+ E+L S K+ PEEILSLP+FKNYT G+P  VLYIKNL+KD+V DDF++IFG
Sbjct: 323  GLDHKPFATPEELESNKLAPEEILSLPQFKNYTVGNPASVLYIKNLSKDMVADDFFYIFG 382

Query: 1028 SLFGSIDAVKSNLTVKLMQEGRMRGQAFVTFPTVELARNALNAVNGYVFKGKPIVIQFGR 1207
            SLFGS+DA K  L+VKLMQEGRMRGQAFVTFP+VELA  ALN VNGYVFKGKP++IQFGR
Sbjct: 383  SLFGSLDAAKVGLSVKLMQEGRMRGQAFVTFPSVELAHQALNLVNGYVFKGKPMIIQFGR 442

Query: 1208 SPAAA 1222
            +P+A+
Sbjct: 443  NPSAS 447


>ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818499 [Glycine max]
          Length = 456

 Score =  455 bits (1170), Expect = e-125
 Identities = 245/419 (58%), Positives = 299/419 (71%), Gaps = 12/419 (2%)
 Frame = +2

Query: 2    DTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNEVTAYQAQRQLHGLRFLGKVLSVERAS 181
            DTL+R+F+++GAS VRPCS  R++NCAF DFKNE+ A QAQRQL+GLRFLGKVLS ERAS
Sbjct: 38   DTLSRIFANFGASFVRPCSSARLRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERAS 97

Query: 182  KVIQDPKQQQSERDFKKDVT-LVKDAFVPKG------STGVYASEPVAEKLGVDYPFPPY 340
               ++ ++   ++  K   T ++ +A V K       S G+   EP+A++LGV+YPFPP+
Sbjct: 98   NPTENGEKSSGDQLGKDPKTSMLMNANVTKPIDGDTKSGGLPIPEPIADRLGVNYPFPPH 157

Query: 341  LEYAYPPPDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRKALXXXXXXXXXXXXX 520
            LEYAYPPPDG+ILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFR AL             
Sbjct: 158  LEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPALP 217

Query: 521  XXXXXXXXXXNMKNXXXXXXXXXXXXXXVGQEARPKR---KRVKRHAIVGPAVDKDVAHE 691
                      N ++                 EAR K+   KR +R  IVGPA+DK VAHE
Sbjct: 218  PPPPAPTVTVNPRSADLSSGESEMESSDEEVEARTKKSGQKRARRETIVGPAIDKGVAHE 277

Query: 692  AVGLKQVALVPKEMPIIKKNNPILQIKLANKQVEPEPKDAAAGKELQESNPENSVREP-- 865
            +VG+K   LVPKE+P+IKKN+ +L+I +  K    E KD    +ELQE  PE  V +P  
Sbjct: 278  SVGVKPATLVPKEIPVIKKNH-VLKINIVPKATVKEHKDDDTTQELQE--PEKDVPDPNK 334

Query: 866  FASLEDLNSGKMPPEEILSLPRFKNYTAGDPTPVLYIKNLAKDVVVDDFYFIFGSLFGSI 1045
            F + ++L  GK+PPEEILSLP FKNYTAG+P PVLYIKNLAKDV+ DDFYFIFGSLFGSI
Sbjct: 335  FFTPDELERGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVIADDFYFIFGSLFGSI 394

Query: 1046 DAVKSNLTVKLMQEGRMRGQAFVTFPTVELARNALNAVNGYVFKGKPIVIQFGRSPAAA 1222
            +A KS L VKLMQEGRMRGQAF+TFP++ELA +ALN VNGYV KGKP++IQFGR+PAAA
Sbjct: 395  EAAKSGLQVKLMQEGRMRGQAFITFPSIELAHHALNLVNGYVLKGKPMIIQFGRNPAAA 453


>ref|XP_002465331.1| hypothetical protein SORBIDRAFT_01g036600 [Sorghum bicolor]
            gi|241919185|gb|EER92329.1| hypothetical protein
            SORBIDRAFT_01g036600 [Sorghum bicolor]
          Length = 467

 Score =  414 bits (1064), Expect = e-113
 Identities = 217/407 (53%), Positives = 273/407 (67%), Gaps = 1/407 (0%)
 Frame = +2

Query: 2    DTLTRLFSHYGASSVRPCSHGRVKNCAFVDFKNEVTAYQAQRQLHGLRFLGKVLSVERAS 181
            + L+RLFSHYGA+SVRPCS G+++NCAFVDF++E  A  A   L+ LRFLGKVL+VERA+
Sbjct: 57   EMLSRLFSHYGATSVRPCSGGKLRNCAFVDFRDEAAANHAHSLLNRLRFLGKVLTVERAN 116

Query: 182  KVIQDPKQQQSERDFKKDVTLVKDAFVPKGSTGVYASEPVAEKLGVDYPFPPYLEYAYPP 361
            +   +    + +      V+ V              +EP+A KLGVDYPFPP+LEYAYPP
Sbjct: 117  RPNANDSHLKHQDQLVHGVSQVPSISSQNQKDHTSTAEPIAPKLGVDYPFPPHLEYAYPP 176

Query: 362  PDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRKALXXXXXXXXXXXXXXXXXXXX 541
            PDG+ILTNIVNALIAVPRFY QVLHLMNKMN+PAPFR AL                    
Sbjct: 177  PDGNILTNIVNALIAVPRFYNQVLHLMNKMNLPAPFRMALPTPPLPSQLPVTPHPQPLPQ 236

Query: 542  XXXNMKNXXXXXXXXXXXXXXVGQEA-RPKRKRVKRHAIVGPAVDKDVAHEAVGLKQVAL 718
                 +                 ++  + K KR K  AIVGPAVDK+VAHEAVG+K  AL
Sbjct: 237  SATTGELHTADLSSDESELESSDEDIDKRKSKRAKHEAIVGPAVDKNVAHEAVGVKPAAL 296

Query: 719  VPKEMPIIKKNNPILQIKLANKQVEPEPKDAAAGKELQESNPENSVREPFASLEDLNSGK 898
            V  E+ +IKK NP+LQIK+A K ++ EP   +  +   +S  E    + F + +++   K
Sbjct: 297  VSNELQVIKKKNPVLQIKIAPKPMQKEPPVPSITENEPDSTHEQLQEKHFVTPQEMLREK 356

Query: 899  MPPEEILSLPRFKNYTAGDPTPVLYIKNLAKDVVVDDFYFIFGSLFGSIDAVKSNLTVKL 1078
            +PPEEILSLP FKNYT G+P  VLYIKNLAKDV  DDFY++FGS+F S+D+ +  L++KL
Sbjct: 357  LPPEEILSLPMFKNYTPGNPASVLYIKNLAKDVTHDDFYYVFGSVFESMDSARLGLSIKL 416

Query: 1079 MQEGRMRGQAFVTFPTVELARNALNAVNGYVFKGKPIVIQFGRSPAA 1219
            MQEGRMRGQAFVTFPTVELA+ ALN  +GYVFKGKP++I FGR+PAA
Sbjct: 417  MQEGRMRGQAFVTFPTVELAQRALNLAHGYVFKGKPMIIHFGRNPAA 463


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