BLASTX nr result

ID: Scutellaria24_contig00022057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022057
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   188   5e-46
emb|CBI22375.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   186   3e-45
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   180   2e-43
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39

>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  188 bits (478), Expect = 5e-46
 Identities = 94/174 (54%), Positives = 121/174 (69%)
 Frame = -1

Query: 522 MTTTCSAEFFPQGLIFTQQKLTCKNPHHTSVFRCRSHSEPKILNYRNSQRVKGSTETRPT 343
           + T  S +FFP    F+ Q     + HHTS+  CR+ +     N RNS +V  S E RP 
Sbjct: 10  LMTIYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPA 69

Query: 342 HLSSYNDSKESHFLKLLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKC 163
           HL SY D +E+H +KLL+RSCKAG ++E LYFLE +VN G+  DVILCTKLIKGFFN K 
Sbjct: 70  HLQSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKN 128

Query: 162 VDKAVKVMRILDRYGEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
           ++KA +VM IL+ + EPD++AYNA ISG CK NQI++A  VL+RM+ RGF PDI
Sbjct: 129 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDI 182


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  186 bits (471), Expect = 3e-45
 Identities = 92/172 (53%), Positives = 120/172 (69%)
 Frame = -1

Query: 516 TTCSAEFFPQGLIFTQQKLTCKNPHHTSVFRCRSHSEPKILNYRNSQRVKGSTETRPTHL 337
           T  S +FFP+   F  Q     + HHTS+  CR+ +     N RN+ +V  S E RP HL
Sbjct: 2   TIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61

Query: 336 SSYNDSKESHFLKLLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKCVD 157
            SY D +E+H +KLL+RSCKAG ++E LYFLE +VN G+  DVILCTKLIKGFFN K ++
Sbjct: 62  QSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 120

Query: 156 KAVKVMRILDRYGEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
           KA +VM IL+ + EPD++AYNA ISG CK N+I++A  VL+RM+ RGF PDI
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = -1

Query: 297 LLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKCVDKAVKVMRIL-DRY 121
           ++   CK G +DEG   +  M + G + + +  + LI        +D+A+ V++++ ++ 
Sbjct: 248 IIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 307

Query: 120 GEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
             PD Y+Y+  IS LCK  ++D A  ++  M   G  PDI
Sbjct: 308 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 347


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  186 bits (471), Expect = 3e-45
 Identities = 92/172 (53%), Positives = 120/172 (69%)
 Frame = -1

Query: 516 TTCSAEFFPQGLIFTQQKLTCKNPHHTSVFRCRSHSEPKILNYRNSQRVKGSTETRPTHL 337
           T  S +FFP+   F  Q     + HHTS+  CR+ +     N RN+ +V  S E RP HL
Sbjct: 2   TIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAHL 61

Query: 336 SSYNDSKESHFLKLLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKCVD 157
            SY D +E+H +KLL+RSCKAG ++E LYFLE +VN G+  DVILCTKLIKGFFN K ++
Sbjct: 62  QSY-DFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 120

Query: 156 KAVKVMRILDRYGEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
           KA +VM IL+ + EPD++AYNA ISG CK N+I++A  VL+RM+ RGF PDI
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDI 172


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  180 bits (456), Expect = 2e-43
 Identities = 92/173 (53%), Positives = 118/173 (68%), Gaps = 1/173 (0%)
 Frame = -1

Query: 516 TTCSAEFFPQGLIFTQQKLT-CKNPHHTSVFRCRSHSEPKILNYRNSQRVKGSTETRPTH 340
           T  S EF P  + FT Q L    N  H+++  C           RN Q+V+ S ETR TH
Sbjct: 2   TLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTH 61

Query: 339 LSSYNDSKESHFLKLLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKCV 160
           + S+ D KE H +KLL+RSC+AG Y+E LYFLE MV+ G+  DVILCTKLIKGFFN + +
Sbjct: 62  VLSF-DFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNI 120

Query: 159 DKAVKVMRILDRYGEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
            KA +VM IL+RYG+PD++AYNA ISG  KANQ+++AN VL RM+ RGF PD+
Sbjct: 121 GKATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDV 173


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  166 bits (420), Expect = 3e-39
 Identities = 87/171 (50%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
 Frame = -1

Query: 507 SAEFFPQGLIFTQQ--KLTCKNPHHTSVFRCRSHSEPKILNYRNSQRVKGSTETRPTHLS 334
           S+EF PQ L FT    K T       S+  CR  ++  + N      V  S E R  H  
Sbjct: 3   SSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLRN------VTSSAEFRQPHFP 56

Query: 333 SYNDSKESHFLKLLHRSCKAGNYDEGLYFLESMVNLGHKADVILCTKLIKGFFNLKCVDK 154
           +  D++++H +KLL+RSC+AG ++E LYFLES+V+ G K DV+LCTKLIKGFFN + + K
Sbjct: 57  NL-DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKK 115

Query: 153 AVKVMRILDRYGEPDIYAYNAFISGLCKANQIDSANPVLSRMRDRGFAPDI 1
           A++VM IL+ YG+PD+Y+YNA ISG  KANQIDSAN V  RMR RGF+PD+
Sbjct: 116 AMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDV 166


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