BLASTX nr result

ID: Scutellaria24_contig00022041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00022041
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   117   1e-24
ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   116   2e-24
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   116   2e-24
emb|CBI36012.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  117 bits (293), Expect = 1e-24
 Identities = 51/63 (80%), Positives = 59/63 (93%)
 Frame = +2

Query: 86  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRVRAIHPLDISHLSDVHY 265
           DMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYD++CNNEQLR+++IHPLD+SHLS +  
Sbjct: 26  DMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQSIHPLDLSHLSKMTG 85

Query: 266 TIY 274
           T Y
Sbjct: 86  TEY 88


>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6 [Vitis vinifera]
          Length = 258

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/63 (82%), Positives = 58/63 (92%)
 Frame = +2

Query: 86  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRVRAIHPLDISHLSDVHY 265
           DMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR+R+IHPLD SHLS +  
Sbjct: 32  DMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTG 91

Query: 266 TIY 274
           T Y
Sbjct: 92  TEY 94


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/63 (82%), Positives = 58/63 (92%)
 Frame = +2

Query: 86  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRVRAIHPLDISHLSDVHY 265
           DMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR+R+IHPLD SHLS +  
Sbjct: 27  DMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTG 86

Query: 266 TIY 274
           T Y
Sbjct: 87  TEY 89


>emb|CBI36012.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +2

Query: 89  MTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRVRAIHPLDISHLSDVHYT 268
           MTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD++CNNEQLR+R+IHPLD SHLS +  T
Sbjct: 1   MTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGT 60

Query: 269 IY 274
            Y
Sbjct: 61  EY 62


>ref|XP_002331927.1| predicted protein [Populus trichocarpa] gi|222874599|gb|EEF11730.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/63 (80%), Positives = 57/63 (90%)
 Frame = +2

Query: 86  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDYSCNNEQLRVRAIHPLDISHLSDVHY 265
           DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD++CNNEQLR ++IHPLD+SHL  +  
Sbjct: 9   DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDLSHLLKMTG 68

Query: 266 TIY 274
           T Y
Sbjct: 69  TEY 71


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