BLASTX nr result

ID: Scutellaria24_contig00021940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021940
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1...   141   6e-32
emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]   141   6e-32
ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1...   138   5e-31
ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31

>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/140 (52%), Positives = 100/140 (71%), Gaps = 9/140 (6%)
 Frame = -1

Query: 395 FQVAAAVSMVSLVYMRVFLPESMMNNSIAA---------KSSETDCLLDKSPSKKWNLFN 243
           FQV+A+V++ SLVYMR FL +S+++  + A         K    D   ++ PSK   +F 
Sbjct: 170 FQVSASVAIASLVYMRFFLQDSIIDEQLTAPILTSNGKPKGKGKDYATNEIPSKNVQIFK 229

Query: 242 NLPSLDDTICLLNTSPTFSKAAVVAFFINVADVGLVASLMYYLKFQFQFNKDQFADLMII 63
           + PSL+D +CLL +S T S+AAVVAFF ++A+VGL ASL+YYLK +F FNKDQFADLM+I
Sbjct: 230 SAPSLEDMLCLLKSSVTLSQAAVVAFFYSLAEVGLHASLLYYLKARFHFNKDQFADLMVI 289

Query: 62  NGVAGVVSQLILMPILTPLI 3
            G+AG +SQL+LMPIL P +
Sbjct: 290 TGIAGTLSQLVLMPILAPAL 309


>ref|XP_002284761.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
           vinifera] gi|302141709|emb|CBI18912.3| unnamed protein
           product [Vitis vinifera]
          Length = 442

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/135 (53%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
 Frame = -1

Query: 395 FQVAAAVSMVSLVYMRVFLPESMMNNSIAAKS--SETDCL--LDKSPSKKWNLFNNLPSL 228
           FQVAA+V+ V+ VYM++FLP+S++ + +  ++   +  C+  LD   ++   +F ++PSL
Sbjct: 170 FQVAASVAAVAAVYMKLFLPDSVIKDGVLDRAILEQKPCVIHLDGESAQDSPVFKSMPSL 229

Query: 227 DDTICLLNTSPTFSKAAVVAFFINVADVGLVASLMYYLKFQFQFNKDQFADLMIINGVAG 48
           DD + LL TS TF+KAA+VAFF N+ DVGL  SLMYYLK +F FNK QFADLM+I+G+AG
Sbjct: 230 DDMLSLLQTSSTFTKAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAG 289

Query: 47  VVSQLILMPILTPLI 3
            +SQL+LMPIL P I
Sbjct: 290 TISQLVLMPILAPTI 304


>emb|CAN64703.1| hypothetical protein VITISV_038996 [Vitis vinifera]
          Length = 408

 Score =  141 bits (355), Expect = 6e-32
 Identities = 72/135 (53%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
 Frame = -1

Query: 395 FQVAAAVSMVSLVYMRVFLPESMMNNSIAAKS--SETDCL--LDKSPSKKWNLFNNLPSL 228
           FQVAA+V+ V+ VYM++FLP+S++ + +  ++   +  C+  LD   ++   +F ++PSL
Sbjct: 170 FQVAASVAAVAAVYMKLFLPDSVIKDGVLDRAILEQKPCVIHLDGESAQDSPVFKSMPSL 229

Query: 227 DDTICLLNTSPTFSKAAVVAFFINVADVGLVASLMYYLKFQFQFNKDQFADLMIINGVAG 48
           DD + LL TS TF+KAA+VAFF N+ DVGL  SLMYYLK +F FNK QFADLM+I+G+AG
Sbjct: 230 DDMLSLLQTSSTFTKAAIVAFFSNLGDVGLHTSLMYYLKARFHFNKHQFADLMMISGIAG 289

Query: 47  VVSQLILMPILTPLI 3
            +SQL+LMPIL P I
Sbjct: 290 TISQLVLMPILAPTI 304


>ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine
           max]
          Length = 443

 Score =  138 bits (347), Expect = 5e-31
 Identities = 72/134 (53%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
 Frame = -1

Query: 395 FQVAAAVSMVSLVYMRVFLPESMMNNSIAA---KSSETDCLLDKSPSKKWNLFNNLPSLD 225
           FQVA+ +SMV+LVYMR+FL +S+   +I     K  E  C  D S  K    F  LPSL 
Sbjct: 170 FQVASVLSMVALVYMRIFLKDSVPGGAIRQPLLKVVEESCAEDDSTPKSAGTFKKLPSLG 229

Query: 224 DTICLLNTSPTFSKAAVVAFFINVADVGLVASLMYYLKFQFQFNKDQFADLMIINGVAGV 45
           D ICLL  SPTFS+AA+V+FF ++AD GL+A L+YYLK +FQFNK+QFADL++I G+   
Sbjct: 230 DFICLLKCSPTFSQAAIVSFFNSLADGGLMAVLLYYLKARFQFNKNQFADLLMITGIGAT 289

Query: 44  VSQLILMPILTPLI 3
           ++QL  MPIL P+I
Sbjct: 290 LAQLFFMPILVPVI 303


>ref|XP_002301947.1| predicted protein [Populus trichocarpa] gi|222843673|gb|EEE81220.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  138 bits (347), Expect = 5e-31
 Identities = 71/143 (49%), Positives = 99/143 (69%), Gaps = 12/143 (8%)
 Frame = -1

Query: 395 FQVAAAVSMVSLVYMRVFLPESMMNNSIAAK------------SSETDCLLDKSPSKKWN 252
           FQV+A V++ +LVYMR FL ES+++  ++               +   C   + PSK   
Sbjct: 145 FQVSALVAIAALVYMRFFLQESIIDEQLSTPILTYKGNGKGKGKANAACFAHEIPSKNVQ 204

Query: 251 LFNNLPSLDDTICLLNTSPTFSKAAVVAFFINVADVGLVASLMYYLKFQFQFNKDQFADL 72
           +F + PSL+D +CLL +S T S+AAVVAFF ++A+VGL ASLMYYLK QF F+KDQFA L
Sbjct: 205 VFKSAPSLEDMLCLLKSSVTLSQAAVVAFFYSLAEVGLHASLMYYLKAQFHFSKDQFAVL 264

Query: 71  MIINGVAGVVSQLILMPILTPLI 3
           M+I+G+AG VSQL++MP+LTP +
Sbjct: 265 MVISGIAGTVSQLVIMPLLTPAL 287


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