BLASTX nr result
ID: Scutellaria24_contig00021764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00021764
(726 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2... 370 e-100
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 363 1e-98
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 363 1e-98
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,... 361 7e-98
ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containi... 356 2e-96
>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
predicted protein [Populus trichocarpa]
Length = 821
Score = 370 bits (950), Expect = e-100
Identities = 182/241 (75%), Positives = 212/241 (87%)
Frame = +3
Query: 3 LISLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKL 182
LI +LK LDLSG+ E+AILLF+W+VLNL + +DNQ +ELM +ILGRESQHS+ASKL
Sbjct: 138 LIGVLKALDLSGDCERAILLFEWLVLNLGTGNVN-LDNQAVELMARILGRESQHSIASKL 196
Query: 183 FDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGK 362
FDVIP+ D++LDVRA+TTILHSYSR GKY++A+A+F+ M L+PTLVTYNVMLDVYGK
Sbjct: 197 FDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGK 256
Query: 363 KGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTV 542
GRSW+KIL LLDEMRS GL FDEFTCSTVISACGREGLLDEAK FF GLK GY PGTV
Sbjct: 257 MGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTV 316
Query: 543 TYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
TYN+LLQV+GKAG+Y+EALS++K+ME+NNCPPD+VTYNELVAAYVRAGF EEGAALI TM
Sbjct: 317 TYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTM 376
Query: 723 T 725
T
Sbjct: 377 T 377
Score = 94.7 bits (234), Expect = 2e-17
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Frame = +3
Query: 150 RESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLV 329
R + + L D + + +TT++++Y R+ + DKA++L+D MK P +
Sbjct: 362 RAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVC 421
Query: 330 TYNVMLDVYGKKGRS---------------------WDKILDL-------------LDEM 407
TYN +L + GKK +S W+ +L + EM
Sbjct: 422 TYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEM 481
Query: 408 RSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVY 587
+S G E D T +T+I+A GR G +A+ +D + G+ P TYN+LL + G +
Sbjct: 482 KSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDW 541
Query: 588 NEALSVLKDMEENNCPPDSVTYNELVAAYVRAGF 689
A SV+KDM+ P +Y+ ++ +Y + G+
Sbjct: 542 RTAESVIKDMKNKGFKPSETSYSLILNSYAKGGY 575
Score = 92.4 bits (228), Expect = 8e-17
Identities = 53/201 (26%), Positives = 101/201 (50%)
Frame = +3
Query: 93 SKSDKIDNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYD 272
SK D ++ GRE A + F + Q + + +L + ++G Y
Sbjct: 273 SKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYS 332
Query: 273 KAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTV 452
+A+++ M+ P VTYN ++ Y + G +++ L+D M G++ + T +T+
Sbjct: 333 EALSIMKEMEDNNCPPDAVTYNELVAAYVRAG-FYEEGAALIDTMTENGIKPNAVTYTTM 391
Query: 453 ISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNC 632
I+A GR +D+A S +D +K +G P TYN++L + GK E + +L DM+ + C
Sbjct: 392 INAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGC 451
Query: 633 PPDSVTYNELVAAYVRAGFNE 695
P+ +T+N +++ G ++
Sbjct: 452 APNRITWNTMLSMCGNKGMHK 472
Score = 91.7 bits (226), Expect = 1e-16
Identities = 53/183 (28%), Positives = 95/183 (51%)
Frame = +3
Query: 177 KLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVY 356
+ F + + D+ + ++L +SR +D+A + ++ L P LVTYN ++D+Y
Sbjct: 616 RAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLY 675
Query: 357 GKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPG 536
+ G W K ++L E+++ G + D + +TVI R+GL+ EA + G P
Sbjct: 676 ARGGECW-KAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPC 734
Query: 537 TVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIG 716
VTYN+ + Y G++ E VL M +++C P+ +TY +V Y +A +E +
Sbjct: 735 IVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVS 794
Query: 717 TMT 725
T+T
Sbjct: 795 TIT 797
Score = 91.3 bits (225), Expect = 2e-16
Identities = 62/230 (26%), Positives = 112/230 (48%)
Frame = +3
Query: 9 SLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKLFD 188
++L G E+A+ +F+ + +S + N M+++ K +GR + L D
Sbjct: 214 TILHSYSRCGKYERAVAIFE-KMNESGLSPTLVTYNVMLDVYGK-MGRSWNKILG--LLD 269
Query: 189 VIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKG 368
+ + D +T++ + R G D+A F +K + P VTYN +L V+GK G
Sbjct: 270 EMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAG 329
Query: 369 RSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTY 548
+ + L ++ EM D T + +++A R G +E + D + NG P VTY
Sbjct: 330 -IYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTY 388
Query: 549 NSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEE 698
+++ YG+A ++ALS+ M+E+ C P+ TYN ++ + +EE
Sbjct: 389 TTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEE 438
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 363 bits (933), Expect = 1e-98
Identities = 179/240 (74%), Positives = 211/240 (87%)
Frame = +3
Query: 3 LISLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKL 182
L+SLLKGLDLSGN ++A+LLF W +LNL S+++KIDNQ++ELMV+ILGRESQHSVA +L
Sbjct: 138 LVSLLKGLDLSGNWKRAVLLFKWAILNL-YSRNEKIDNQLVELMVRILGRESQHSVALRL 196
Query: 183 FDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGK 362
D I V++++LDVRAWTTILH+YSR GKY++AI +F+ M+ L+PTLVTYNVMLDVYGK
Sbjct: 197 LDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGK 256
Query: 363 KGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTV 542
GRSW+KIL LLDEMRS GLEFDEFTCSTVISACGREGLLDEA+ FF LK GYV GT
Sbjct: 257 MGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTF 316
Query: 543 TYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
TYNSLLQV+GKAG+Y+EALS+LK+ME+NNCPPD VTYNELVAAYVRAGF+EEGA I TM
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Score = 102 bits (254), Expect = 8e-20
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Frame = +3
Query: 84 LDVSKSD--KIDNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSR 257
LD +S+ + D ++ GRE A K F + + + + ++L + +
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 258 SGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEF 437
+G Y +A+++ M+ P LVTYN ++ Y + G ++ D +D M G+ +
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFH-EEGADFIDTMIRKGIMPNAI 386
Query: 438 TCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDM 617
T +TVI+A G+ G D+A SFF +K +G VP TYN++L + GK E + +L DM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 618 EENNCPPDSVTYNELVAAYVRAGFNE 695
N C P+SVT+N ++A G ++
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHK 472
Score = 97.1 bits (240), Expect = 3e-18
Identities = 55/188 (29%), Positives = 99/188 (52%)
Frame = +3
Query: 150 RESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLV 329
R H + D + + + +TT++++Y ++GK DKA++ F MK P +
Sbjct: 362 RAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVC 421
Query: 330 TYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDG 509
TYN +L + GKK R ++++D+L +MRS G + T +T+++ CG +G+ F
Sbjct: 422 TYNAILGMLGKKSRL-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480
Query: 510 LKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGF 689
+K G+ P T+N+L+ YG+ G + + + ++M + P TYN L+ A R G
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGD 540
Query: 690 NEEGAALI 713
E ++I
Sbjct: 541 WEAAESVI 548
Score = 84.3 bits (207), Expect = 2e-14
Identities = 47/170 (27%), Positives = 91/170 (53%)
Frame = +3
Query: 216 DVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDL 395
D+ + ++L ++++ YD+A + ++ L P LVTYN ++D+Y + G W K ++
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW-KGEEI 687
Query: 396 LDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGK 575
L ++ G + D + +TVI R+GL+ EA + ++G P VTYN+ + Y
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 576 AGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTMT 725
G+++E V+ M +++C P+ +TY +V Y + +E + +T
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNIT 797
Score = 67.8 bits (164), Expect = 2e-09
Identities = 45/164 (27%), Positives = 80/164 (48%)
Frame = +3
Query: 231 TTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMR 410
T +L ++ R A +F K P LV +N ML ++ K + +D+ ++L +R
Sbjct: 600 TLVLANFKRRALMGMERAFQEFCK-HGYKPDLVLFNSMLSIFAKN-KMYDRAHEMLRLIR 657
Query: 411 SVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYN 590
GL+ D T ++++ R G + + G++ +G P V+YN++++ + + G+
Sbjct: 658 ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQ 717
Query: 591 EALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
EA+ L +M + P VTYN VA Y G E +I M
Sbjct: 718 EAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 363 bits (933), Expect = 1e-98
Identities = 179/240 (74%), Positives = 211/240 (87%)
Frame = +3
Query: 3 LISLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKL 182
L+SLLKGLDLSGN ++A+LLF W +LNL S+++KIDNQ++ELMV+ILGRESQHSVA +L
Sbjct: 138 LVSLLKGLDLSGNWKRAVLLFKWAILNL-YSRNEKIDNQLVELMVRILGRESQHSVALRL 196
Query: 183 FDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGK 362
D I V++++LDVRAWTTILH+YSR GKY++AI +F+ M+ L+PTLVTYNVMLDVYGK
Sbjct: 197 LDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGK 256
Query: 363 KGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTV 542
GRSW+KIL LLDEMRS GLEFDEFTCSTVISACGREGLLDEA+ FF LK GYV GT
Sbjct: 257 MGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTF 316
Query: 543 TYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
TYNSLLQV+GKAG+Y+EALS+LK+ME+NNCPPD VTYNELVAAYVRAGF+EEGA I TM
Sbjct: 317 TYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376
Score = 102 bits (254), Expect = 8e-20
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 2/206 (0%)
Frame = +3
Query: 84 LDVSKSD--KIDNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSR 257
LD +S+ + D ++ GRE A K F + + + + ++L + +
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 258 SGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEF 437
+G Y +A+++ M+ P LVTYN ++ Y + G ++ D +D M G+ +
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFH-EEGADFIDTMIRKGIMPNAI 386
Query: 438 TCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDM 617
T +TVI+A G+ G D+A SFF +K +G VP TYN++L + GK E + +L DM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446
Query: 618 EENNCPPDSVTYNELVAAYVRAGFNE 695
N C P+SVT+N ++A G ++
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHK 472
Score = 97.1 bits (240), Expect = 3e-18
Identities = 55/188 (29%), Positives = 99/188 (52%)
Frame = +3
Query: 150 RESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLV 329
R H + D + + + +TT++++Y ++GK DKA++ F MK P +
Sbjct: 362 RAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVC 421
Query: 330 TYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDG 509
TYN +L + GKK R ++++D+L +MRS G + T +T+++ CG +G+ F
Sbjct: 422 TYNAILGMLGKKSRL-EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE 480
Query: 510 LKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGF 689
+K G+ P T+N+L+ YG+ G + + + ++M + P TYN L+ A R G
Sbjct: 481 MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGD 540
Query: 690 NEEGAALI 713
E ++I
Sbjct: 541 WEAAESVI 548
Score = 84.3 bits (207), Expect = 2e-14
Identities = 47/170 (27%), Positives = 91/170 (53%)
Frame = +3
Query: 216 DVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDL 395
D+ + ++L ++++ YD+A + ++ L P LVTYN ++D+Y + G W K ++
Sbjct: 629 DLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECW-KGEEI 687
Query: 396 LDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGK 575
L ++ G + D + +TVI R+GL+ EA + ++G P VTYN+ + Y
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 576 AGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTMT 725
G+++E V+ M +++C P+ +TY +V Y + +E + +T
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDFVSNIT 797
Score = 67.8 bits (164), Expect = 2e-09
Identities = 45/164 (27%), Positives = 80/164 (48%)
Frame = +3
Query: 231 TTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMR 410
T +L ++ R A +F K P LV +N ML ++ K + +D+ ++L +R
Sbjct: 600 TLVLANFKRRALMGMERAFQEFCK-HGYKPDLVLFNSMLSIFAKN-KMYDRAHEMLRLIR 657
Query: 411 SVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYN 590
GL+ D T ++++ R G + + G++ +G P V+YN++++ + + G+
Sbjct: 658 ESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQ 717
Query: 591 EALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
EA+ L +M + P VTYN VA Y G E +I M
Sbjct: 718 EAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYM 761
>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 361 bits (927), Expect = 7e-98
Identities = 177/240 (73%), Positives = 210/240 (87%)
Frame = +3
Query: 3 LISLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKL 182
LISLLK LD SGN EKA+LLF+W VLNL ++ ++KID IELMV+ILGRESQH+VASKL
Sbjct: 151 LISLLKALDYSGNWEKALLLFEWSVLNLGIA-NEKIDRHAIELMVRILGRESQHTVASKL 209
Query: 183 FDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGK 362
FDVIP+ D+ LDVRA+TTILH+YSR+GKY +AI +F+ M L+P+LVTYNVMLDVYGK
Sbjct: 210 FDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGK 269
Query: 363 KGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTV 542
GRSWDKIL+LLDEMRS GL+FDEFTCSTV+SACGREGL+DEA+ FF GLK GY PGTV
Sbjct: 270 MGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTV 329
Query: 543 TYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
TYN+LL V+GKAG+++EALSVL +MEENNCPPD+VTYNE+VAAYVRAGF+EEGA +I M
Sbjct: 330 TYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAM 389
Score = 97.4 bits (241), Expect = 3e-18
Identities = 51/193 (26%), Positives = 99/193 (51%)
Frame = +3
Query: 132 MVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRE 311
++ + G+ S A + + + D + ++ +Y R+G +++ + D M +
Sbjct: 334 LLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKG 393
Query: 312 LNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEA 491
+ P VTY +++ YG+ G DK L++ D+M +G + T + V+ G++ L +E
Sbjct: 394 IMPNAVTYTTIINAYGRVG-DIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEM 452
Query: 492 KSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAA 671
+KLNG P +T+N++L + GK G++ V ++M+ PD T+N L++A
Sbjct: 453 MKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISA 512
Query: 672 YVRAGFNEEGAAL 710
Y R G N + A +
Sbjct: 513 YGRCGSNNDAAKM 525
Score = 94.0 bits (232), Expect = 3e-17
Identities = 53/179 (29%), Positives = 93/179 (51%)
Frame = +3
Query: 150 RESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLV 329
R H + + D + + + +TTI+++Y R G DKA+ +FD M P +
Sbjct: 375 RAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVA 434
Query: 330 TYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDG 509
TYN +L + GKK S ++++ +L M+ G + T +T+++ CG++G+ F
Sbjct: 435 TYNAVLGMLGKKSLS-EEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFRE 493
Query: 510 LKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAG 686
+K G+ P T+N+L+ YG+ G N+A + ++M + P TYN L+ A R G
Sbjct: 494 MKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRG 552
Score = 92.8 bits (229), Expect = 6e-17
Identities = 66/238 (27%), Positives = 113/238 (47%)
Frame = +3
Query: 9 SLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKLFD 188
++L +G +AI +F+ + + +S S N M+++ K +GR + +L D
Sbjct: 227 TILHAYSRTGKYHRAIEIFERMNES-GLSPSLVTYNVMLDVYGK-MGRSWDKIL--ELLD 282
Query: 189 VIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKG 368
+ + D +T+L + R G D+A F +K P VTYN +L V+GK G
Sbjct: 283 EMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAG 342
Query: 369 RSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTY 548
+ + L +L EM D T + V++A R G +E D + G +P VTY
Sbjct: 343 -IFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTY 401
Query: 549 NSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
+++ YG+ G ++AL + M E C P+ TYN ++ + +EE ++G M
Sbjct: 402 TTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHM 459
Score = 75.1 bits (183), Expect = 1e-11
Identities = 44/169 (26%), Positives = 83/169 (49%)
Frame = +3
Query: 177 KLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVY 356
+ F + + D+ ++L ++++ YD+A + + L P LVT+N ++D+Y
Sbjct: 629 RAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMY 688
Query: 357 GKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPG 536
+ G W K ++L +++ G + D + +TVI R+GL+ E + G P
Sbjct: 689 ARGGDCW-KAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPC 747
Query: 537 TVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRA 683
TYN+ + Y G++ E V+ M +NC P+ +TY + Y +A
Sbjct: 748 IFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKA 796
Score = 68.9 bits (167), Expect = 1e-09
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Frame = +3
Query: 111 DNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALF 290
D ++ GR ++ A+K+ + + F+ + + +L++ +R G + A ++
Sbjct: 502 DRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVI 561
Query: 291 DFMKLRELNPTLVTYNVMLDVYGKKGR------------------SWDKILDLL------ 398
M+ + P+ +Y++M+ Y K G SW + L+
Sbjct: 562 LDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKC 621
Query: 399 ----------DEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTY 548
++ G + D C++++S + + D A + G P VT+
Sbjct: 622 RSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTH 681
Query: 549 NSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTMT 725
NSL+ +Y + G +A VL+ ++ + PD V+YN ++ + R G +EG ++ MT
Sbjct: 682 NSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMT 740
Score = 58.9 bits (141), Expect = 1e-06
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 3/176 (1%)
Frame = +3
Query: 105 KIDNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIA 284
K D + M+ I + + + A ++ +I D+ +++ Y+R G KA
Sbjct: 640 KPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEE 699
Query: 285 LFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISAC 464
+ ++ P LV+YN ++ + +KG + I +L EM S+G+ FT +T IS
Sbjct: 700 VLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIR-ILSEMTSIGVGPCIFTYNTFISGY 758
Query: 465 GREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEAL---SVLKDMEE 623
+G+ E + ++ P +TY + Y KA Y+EA+ S +KD+++
Sbjct: 759 AAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKDVDD 814
>ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 356 bits (914), Expect = 2e-96
Identities = 174/239 (72%), Positives = 207/239 (86%)
Frame = +3
Query: 9 SLLKGLDLSGNSEKAILLFDWVVLNLDVSKSDKIDNQMIELMVKILGRESQHSVASKLFD 188
SLLK LDLSGN E+A+LLF+W L+ ++ ++DNQ++ELMV+ILGRESQHS+ASKLFD
Sbjct: 145 SLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFD 204
Query: 189 VIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKG 368
+IPV+ ++LDVRA+TTILHSY+R+GKY +AI LF MK L+PTLVTYNVMLDVYGK G
Sbjct: 205 LIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMG 264
Query: 369 RSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTY 548
RSWD+IL+LLDEMRS GLE DEFTCSTVISACGREG+LDEA+ F LK NGY PGTVTY
Sbjct: 265 RSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTY 324
Query: 549 NSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTMT 725
NS+LQV+GKAG+Y EALS+LK+ME+NNCPPDSVTYNEL A YVRAGF +EG A+I TMT
Sbjct: 325 NSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMT 383
Score = 99.8 bits (247), Expect = 5e-19
Identities = 54/197 (27%), Positives = 101/197 (51%)
Frame = +3
Query: 132 MVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRE 311
M+++ G+ ++ A + + + D + + +Y R+G D+ +A+ D M +
Sbjct: 327 MLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKG 386
Query: 312 LNPTLVTYNVMLDVYGKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEA 491
+ P +TY ++D YGK GR D L L M+ +G + +T ++V++ G++ ++
Sbjct: 387 VMPNAITYTTVIDAYGKAGRE-DDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDV 445
Query: 492 KSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAA 671
+KLNG P T+N++L V + G +N VL++M+ PD T+N L++A
Sbjct: 446 IKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISA 505
Query: 672 YVRAGFNEEGAALIGTM 722
Y R G + A + G M
Sbjct: 506 YARCGSEVDSAKMYGEM 522
Score = 95.9 bits (237), Expect = 8e-18
Identities = 56/174 (32%), Positives = 92/174 (52%)
Frame = +3
Query: 177 KLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVY 356
+ FD + + D+ ++L ++R+ + KA + F+ L P L TYN ++D+Y
Sbjct: 622 RAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLY 681
Query: 357 GKKGRSWDKILDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPG 536
++G W K ++L +++ G E D + +TVI R+GL+ EA + G P
Sbjct: 682 VREGECW-KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPT 740
Query: 537 TVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEE 698
VTYN+ L Y +++EA V++ M E+NC P +TY LV Y +AG EE
Sbjct: 741 IVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEE 794
Score = 82.4 bits (202), Expect = 9e-14
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 37/190 (19%)
Frame = +3
Query: 228 WTTILHSYSRSGKYDKAIALFDFMKLRELNPTLVTYNVMLDVYGKKGRS----------- 374
+TT++ +Y ++G+ D A+ LF MK P + TYN +L + GKK R+
Sbjct: 394 YTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMK 453
Query: 375 ----------WDKIL-------------DLLDEMRSVGLEFDEFTCSTVISA---CGREG 476
W+ +L +L EM++ G E D+ T +T+ISA CG E
Sbjct: 454 LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSE- 512
Query: 477 LLDEAKSFFDGLKLNGYVPGTVTYNSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYN 656
+D AK + + +K +G+ P TYN+LL + G + A SV++DM P+ +Y+
Sbjct: 513 -VDSAKMYGEMVK-SGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYS 570
Query: 657 ELVAAYVRAG 686
L+ Y +AG
Sbjct: 571 LLLHCYSKAG 580
Score = 66.6 bits (161), Expect = 5e-09
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 34/239 (14%)
Frame = +3
Query: 111 DNQMIELMVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSGKYDKAIALF 290
D ++ R ++K++ + FT V + +L++ +R G + A ++
Sbjct: 495 DKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVI 554
Query: 291 DFMKLRELNPTLVTYNVMLDVYGKKGR------------------SWDKILDLL------ 398
M+ + P +Y+++L Y K G SW + L+
Sbjct: 555 QDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKC 614
Query: 399 ----------DEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTY 548
D+++ G + D ++++S R + +A+ + G P TY
Sbjct: 615 RHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTY 674
Query: 549 NSLLQVYGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTMT 725
N L+ +Y + G +A VLK ++ + PD V+YN ++ + R G +E ++ MT
Sbjct: 675 NCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMT 733
Score = 65.1 bits (157), Expect = 1e-08
Identities = 51/232 (21%), Positives = 98/232 (42%), Gaps = 35/232 (15%)
Frame = +3
Query: 132 MVKILGRESQHSVASKLFDVIPVQDFTLDVRAWTTILHSYSRSG------KYDKAI---- 281
++ L R A + + + F + +++ +LH YS++G K +K I
Sbjct: 537 LLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGH 596
Query: 282 -------------------------ALFDFMKLRELNPTLVTYNVMLDVYGKKGRSWDKI 386
FD ++ P LV N ML ++ + + + K
Sbjct: 597 VFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARN-KMFSKA 655
Query: 387 LDLLDEMRSVGLEFDEFTCSTVISACGREGLLDEAKSFFDGLKLNGYVPGTVTYNSLLQV 566
++L + GL+ + FT + ++ REG +A+ G++ +G P V+YN++++
Sbjct: 656 REMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKG 715
Query: 567 YGKAGVYNEALSVLKDMEENNCPPDSVTYNELVAAYVRAGFNEEGAALIGTM 722
+ + G+ EA+ VL +M P VTYN ++ Y +E +I M
Sbjct: 716 FCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFM 767