BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021658
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32760.3| unnamed protein product [Vitis vinifera]               93   5e-17
ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...    90   4e-16
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...    74   3e-11
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...    72   1e-10

>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
 Frame = +1

Query: 106 MEAGRSLVSSPLQFSLRTNIRNRSSSASVVLLHEQVXXXXXXXXXXXXXXXXXXXVLNQD 285
           MEAG +++SS   F  RT+ RN  SS+SV++LH+QV                   VL Q+
Sbjct: 1   MEAGTNILSSTPSFPPRTHFRN--SSSSVLMLHDQVAPAVASIPTTIARKFPTS-VLLQE 57

Query: 286 QRNESRPL--CLKEDNSTYLKIVDSQLSPASSSHEGSNCDDPDQHINDIQLQLLHKPELW 459
           QR+E RP    LK++ +    +   Q+    S+ E  N DD +Q++ + + QLL +P LW
Sbjct: 58  QRDEYRPFPQALKDERTFQATLEKRQMEIVVSADE-ENSDDHNQYMVNFERQLLLQPGLW 116

Query: 460 YLWPSLQRQGNSFPMTT---ESISSKSETLTGLEADHVVALARKAFSACKEAISIAEDAK 630
           Y  PS Q  G   P ++   +SI++  E    ++   V+ALA+KA SA K+A+S+ E+AK
Sbjct: 117 YSLPSSQT-GEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQAVSLYENAK 175

Query: 631 PYGVDVDGSSS 663
             G D++ S S
Sbjct: 176 LLGADLEDSPS 186


>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
 Frame = +1

Query: 106 MEAGRSLVSSPLQFSLRTNIRNRSSSAS---------VVLLHEQVXXXXXXXXXXXXXXX 258
           MEAG +++SS   F  RT+ RN SSS +         V++LH+QV               
Sbjct: 1   MEAGTNILSSTPSFPPRTHFRNSSSSGNAFFFYVVLFVLMLHDQVAPAVASIPTTIARKF 60

Query: 259 XXXXVLNQDQRNESRPL--CLKEDNSTYLKIVDSQLSPASSSHEGSNCDDPDQHINDIQL 432
               VL Q+QR+E RP    LK++ +    +   Q+    S+ E  N DD +Q++ + + 
Sbjct: 61  PTS-VLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIVVSADE-ENSDDHNQYMVNFER 118

Query: 433 QLLHKPELWYLWPSLQRQGNSFPMTT---ESISSKSETLTGLEADHVVALARKAFSACKE 603
           QLL +P LWY  PS Q  G   P ++   +SI++  E    ++   V+ALA+KA SA K+
Sbjct: 119 QLLLQPGLWYSLPSSQT-GEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQ 177

Query: 604 AISIAEDAKPYGVDVDGSSS 663
           A+S+ E+AK  G D++ S S
Sbjct: 178 AVSLYENAKLLGADLEDSPS 197


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
 Frame = +1

Query: 106 MEAGRSLVSSPLQFSLRTNIRNRSSSASVVLLHEQVXXXXXXXXXXXXXXXXXXXVLNQD 285
           MEAGR+L+SS   F  RT+++N S ++SV++L EQ                    VL Q+
Sbjct: 1   MEAGRTLLSSSPSFPTRTHLKN-SLTSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQE 59

Query: 286 QRNESRPL--CLKEDNSTYLKIVDSQLSPASSSHEGSNCDDPDQHINDIQLQLLHKPELW 459
           QR+E RPL    KED ++   +   +    +S HEG + D+ DQ + + + QL H P  W
Sbjct: 60  QRDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYW 119

Query: 460 YLWPSLQRQGNSFPMTTESISSKSETLTGLEADHVVALARKAFSACKEAISIAEDAKPYG 639
            L                     ++ L  +E  +V+ LA++A SA K A  +A++     
Sbjct: 120 NL---------------------TDKLIDVEPTNVINLAKRALSASKHAAFLADN----N 154

Query: 640 VDVDGSSS 663
            D+D  +S
Sbjct: 155 TDLDNLAS 162


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 4/179 (2%)
 Frame = +1

Query: 106 MEAGRSLVSSPLQFSLRTNIRNRSSSASVVLLHEQ-VXXXXXXXXXXXXXXXXXXXVLNQ 282
           MEA R+LVSS   F  +T++++ SS +SVV+LHEQ                     VL+Q
Sbjct: 1   MEATRNLVSSSPSFQTKTHLKSYSSPSSVVMLHEQTTTPVVNSRHLNSLSRHFPASVLSQ 60

Query: 283 DQRNESRPL--CLKEDNSTYLKIVDSQLSPASSSHEGSNCDDPDQHINDIQLQLLHKPEL 456
           + R ESRPL   L+ED ++ L +   Q     SS E              + QLLH   L
Sbjct: 61  EPREESRPLSHALREDRTSQLTLERRQFDELVSSREDEK----------FEQQLLHSAGL 110

Query: 457 WYLWPSLQRQGNSFPMTTES-ISSKSETLTGLEADHVVALARKAFSACKEAISIAEDAK 630
           W L  S        P+T E+ +      L   E   +VALA+KA SA K+A  +A+D +
Sbjct: 111 WNLLIS--------PLTAETKLPPVVPPLADAELCDIVALAQKALSASKQAALLADDTE 161


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 59/180 (32%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
 Frame = +1

Query: 106 MEAGRSLVSSPLQFSLRTNIRNRSSSAS------VVLLHEQVXXXXXXXXXXXXXXXXXX 267
           ME  R+ +SSP  F  RT+ +N  SS+       V +LHEQ                   
Sbjct: 1   METARTFLSSPPPFPSRTHFKNSLSSSDAYVDNFVFMLHEQAVPAVTSAPTTSIARNFPT 60

Query: 268 XVLNQDQRNESRPLC--LKEDNSTYLKIVDSQLSPASSSHEGSNCDDPDQHINDIQLQLL 441
            VL Q+QR+E RPL    KED +    +   Q+ P +S  EG   D  DQ I       L
Sbjct: 61  SVLLQEQRDEFRPLLNIFKEDKTFQATVDTKQMDPGTSDQEGICSDVLDQLI-------L 113

Query: 442 HKPELWYLWPSLQRQGNSFPMTTESISSKSETLTGLEADHVVALARKAFSACKEAISIAE 621
           H    W L             T +SI++ ++ L  +E  +V+ LARKA SA KEA  +A+
Sbjct: 114 HSNLSWSL-------------TMQSITTNTDELMVVEPTNVIDLARKALSASKEAALLAQ 160