BLASTX nr result

ID: Scutellaria24_contig00021605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021605
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...    84   9e-15
gb|AFW69452.1| hypothetical protein ZEAMMB73_039078 [Zea mays]         79   5e-13
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_003563549.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    77   1e-12
ref|NP_001143047.1| uncharacterized protein LOC100275515 [Zea ma...    77   1e-12

>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/66 (62%), Positives = 47/66 (71%)
 Frame = -2

Query: 199 ETPTGSAAKKVRQHGGEAAENHQSLLPGIPDHIAQLCLSLVPPSNLYWVCRSWRRLIYSP 20
           ET   + AK  RQ      +    L+PG+PDH+AQLCLSLVPPS LY VC SWRRLIYSP
Sbjct: 8   ETTARNTAK--RQRLTRLHQQQPDLIPGLPDHVAQLCLSLVPPSLLYSVCHSWRRLIYSP 65

Query: 19  SFPPFL 2
           +FPPFL
Sbjct: 66  AFPPFL 71


>gb|AFW69452.1| hypothetical protein ZEAMMB73_039078 [Zea mays]
          Length = 415

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/76 (53%), Positives = 50/76 (65%), Gaps = 9/76 (11%)
 Frame = -2

Query: 202 PETPTGSAAKKVRQHGGEAAENH---------QSLLPGIPDHIAQLCLSLVPPSNLYWVC 50
           P T  G AA+  ++H   AA  H         Q LLPG+PDH+AQLCL+ +PP  L+ VC
Sbjct: 15  PATAAG-AAEPNKRHRTAAAPAHMDAEPEQEEQPLLPGLPDHLAQLCLAPLPPRLLHAVC 73

Query: 49  RSWRRLIYSPSFPPFL 2
           R WRRL+YSPSFPPFL
Sbjct: 74  RPWRRLLYSPSFPPFL 89


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/76 (52%), Positives = 50/76 (65%)
 Frame = -2

Query: 232 SNPLSTTILGPETPTGSAAKKVRQHGGEAAENHQSLLPGIPDHIAQLCLSLVPPSNLYWV 53
           +N + T+I    T   +  +++   G    E  Q L+PG+P+ IAQLCLSLV PS LY V
Sbjct: 2   ANSIQTSITDTTTENPTKRRQLITDGHRHLE--QPLIPGLPNDIAQLCLSLVHPSTLYSV 59

Query: 52  CRSWRRLIYSPSFPPF 5
           C SWRRLIYSPSFPPF
Sbjct: 60  CHSWRRLIYSPSFPPF 75


>ref|XP_003563549.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Brachypodium
           distachyon]
          Length = 420

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = -2

Query: 145 AENHQSLLPGIPDHIAQLCLSLVPPSNLYWVCRSWRRLIYSPSFPPFL 2
           A + Q LLPG+PDH+AQLCLS +PP  L+ VCR WRRL+Y+PSFPPFL
Sbjct: 52  ASSSQPLLPGLPDHLAQLCLSPLPPRLLHAVCRPWRRLLYAPSFPPFL 99


>ref|NP_001143047.1| uncharacterized protein LOC100275515 [Zea mays]
           gi|195613482|gb|ACG28571.1| hypothetical protein [Zea
           mays]
          Length = 411

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 9/70 (12%)
 Frame = -2

Query: 184 SAAKKVRQHGGEAAENH---------QSLLPGIPDHIAQLCLSLVPPSNLYWVCRSWRRL 32
           +AA+  ++H   AA  H         Q LLPG+PDH+AQLCL+ +PP  L+ VCR WRRL
Sbjct: 17  AAAEPNKRHRTAAAPAHMDAEPEQEDQPLLPGLPDHLAQLCLAPLPPLLLHAVCRPWRRL 76

Query: 31  IYSPSFPPFL 2
           +YSPSFPPFL
Sbjct: 77  LYSPSFPPFL 86


Top