BLASTX nr result

ID: Scutellaria24_contig00021509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021509
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vi...   194   6e-48
ref|XP_002528998.1| DNA binding protein, putative [Ricinus commu...   190   1e-46
ref|XP_002300622.1| chromatin remodeling complex subunit [Populu...   186   1e-45
ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   186   2e-45
ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-lik...   186   2e-45

>ref|XP_002275451.1| PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]
           gi|297745602|emb|CBI40767.3| unnamed protein product
           [Vitis vinifera]
          Length = 492

 Score =  194 bits (493), Expect = 6e-48
 Identities = 88/111 (79%), Positives = 99/111 (89%)
 Frame = +2

Query: 8   EPDVIHIPSYSRWFSWNAVHECEARFLPEFFDGRSPSKNPRIYKYYRNSIIRRFRENPSR 187
           EP+ I+IPSYSRWFSWN VHECE RFLPEFFD RSPSKNPR+YKYYRNSII  FR+NPSR
Sbjct: 54  EPETINIPSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFRQNPSR 113

Query: 188 KITFTEVRKTIVGDVGSIRRVFDFLEAWGLINYAGTNSKPHLKWEDKEAKS 340
           K+TFT+VRK +VGDVGSIRRVFDFLEAWGLINY+G+  K  LKWE+K+ KS
Sbjct: 114 KLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKS 164


>ref|XP_002528998.1| DNA binding protein, putative [Ricinus communis]
           gi|223531538|gb|EEF33368.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 482

 Score =  190 bits (482), Expect = 1e-46
 Identities = 88/112 (78%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
 Frame = +2

Query: 8   EPDVIHIPSYSRWFSWNAVHECEARFLPEFFDGRSPSKNPRIYKYYRNSIIRRFRE-NPS 184
           + DV+HIPSYSRWFSWN++HECE RFLP+FFD RSPSKNPR+YKYYRNSII+ FR+ NPS
Sbjct: 59  DADVVHIPSYSRWFSWNSIHECEVRFLPDFFDSRSPSKNPRVYKYYRNSIIKCFRQNNPS 118

Query: 185 RKITFTEVRKTIVGDVGSIRRVFDFLEAWGLINYAGTNSKPHLKWEDKEAKS 340
            KITFTEVRKT+VGDVGSIRRVFDFLEAWGLINY  +     LKWEDK+AKS
Sbjct: 119 VKITFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALSKPLKWEDKDAKS 170


>ref|XP_002300622.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222842348|gb|EEE79895.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 500

 Score =  186 bits (473), Expect = 1e-45
 Identities = 84/111 (75%), Positives = 97/111 (87%)
 Frame = +2

Query: 8   EPDVIHIPSYSRWFSWNAVHECEARFLPEFFDGRSPSKNPRIYKYYRNSIIRRFRENPSR 187
           EPDV+HIPSYSRWFSW+ +HECE RFLPEFFD RSPSKNP +YKYYRNSII +FR+NPS 
Sbjct: 46  EPDVVHIPSYSRWFSWDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSA 105

Query: 188 KITFTEVRKTIVGDVGSIRRVFDFLEAWGLINYAGTNSKPHLKWEDKEAKS 340
           K+TFTE+RKT+VGDVGSIRRVFDFL+AWGLINY+  N +  LKWED +  S
Sbjct: 106 KLTFTEIRKTLVGDVGSIRRVFDFLDAWGLINYSPLNKQ--LKWEDGKDSS 154


>ref|XP_004157113.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 555

 Score =  186 bits (472), Expect = 2e-45
 Identities = 81/110 (73%), Positives = 96/110 (87%)
 Frame = +2

Query: 11  PDVIHIPSYSRWFSWNAVHECEARFLPEFFDGRSPSKNPRIYKYYRNSIIRRFRENPSRK 190
           PD IH+PSYSRWFSWN +HECE RFLPEFFD RSPSKNPR+YKY RNSI++ FRE PS+K
Sbjct: 126 PDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKK 185

Query: 191 ITFTEVRKTIVGDVGSIRRVFDFLEAWGLINYAGTNSKPHLKWEDKEAKS 340
           ITFT++RKT+V DVGSIRRVFDFLEAWGLINY+ +     LKW+D+++KS
Sbjct: 186 ITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS 235


>ref|XP_004145606.1| PREDICTED: SWI/SNF complex subunit SWI3B-like [Cucumis sativus]
          Length = 493

 Score =  186 bits (472), Expect = 2e-45
 Identities = 81/110 (73%), Positives = 96/110 (87%)
 Frame = +2

Query: 11  PDVIHIPSYSRWFSWNAVHECEARFLPEFFDGRSPSKNPRIYKYYRNSIIRRFRENPSRK 190
           PD IH+PSYSRWFSWN +HECE RFLPEFFD RSPSKNPR+YKY RNSI++ FRE PS+K
Sbjct: 64  PDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECPSKK 123

Query: 191 ITFTEVRKTIVGDVGSIRRVFDFLEAWGLINYAGTNSKPHLKWEDKEAKS 340
           ITFT++RKT+V DVGSIRRVFDFLEAWGLINY+ +     LKW+D+++KS
Sbjct: 124 ITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKS 173


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