BLASTX nr result

ID: Scutellaria24_contig00021500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021500
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula] gi|...    61   1e-14
gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabid...    56   7e-14
gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [...    56   7e-14
ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thalian...    56   7e-14
ref|NP_851130.1| DNA polymerase eta subunit [Arabidopsis thalian...    56   7e-14

>ref|XP_003638302.1| DNA polymerase eta [Medicago truncatula]
           gi|355504237|gb|AES85440.1| DNA polymerase eta [Medicago
           truncatula]
          Length = 543

 Score = 61.2 bits (147), Expect(2) = 1e-14
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -3

Query: 296 KQLGGKLGTSLQADLCVNTVGDLLQFSKEKLQER 195
           KQLGGKLGTSLQ+DL +NTVGDLLQFS+EKLQ+R
Sbjct: 251 KQLGGKLGTSLQSDLGINTVGDLLQFSEEKLQQR 284



 Score = 43.1 bits (100), Expect(2) = 1e-14
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
 Frame = -2

Query: 189 TWLCNIARGICGDEVKGRLLPQS----------RALKAIYVVQKXXXXXXXXXXXXXXXX 40
           TWL NIARGI G+EV+GRLLP+S          +ALK I  VQ                 
Sbjct: 291 TWLWNIARGISGEEVEGRLLPKSHGSGKTFPGPQALKTIASVQHWLNELGEELSERLDSD 350

Query: 39  XEQNRRLCKCL 7
            +QN+R+   L
Sbjct: 351 MDQNKRIAHTL 361


>gb|AAC79146.1| similar to DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|9758378|dbj|BAB08827.1| DNA-damage-inducible protein
           P [Arabidopsis thaliana]
          Length = 689

 Score = 56.2 bits (134), Expect(2) = 7e-14
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 296 KQLGGKLGTSLQADLCVNTVGDLLQFSKEKLQE 198
           KQLGGKLGTSLQ DL V+TVGDLLQFS+ KLQE
Sbjct: 263 KQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQE 295



 Score = 45.4 bits (106), Expect(2) = 7e-14
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
 Frame = -2

Query: 189 TWLCNIARGICGDEVKGRLLPQS----------RALKAIYVVQKXXXXXXXXXXXXXXXX 40
           TWL NIARGI G+EV+GRLLP+S          RALK++  VQ                 
Sbjct: 303 TWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSD 362

Query: 39  XEQNRRLCKCL 7
            EQN+R+   L
Sbjct: 363 LEQNKRIASTL 373


>gb|AAN39011.1| putative translesion synthesis polymerase RAD30 [Arabidopsis
           thaliana]
          Length = 672

 Score = 56.2 bits (134), Expect(2) = 7e-14
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 296 KQLGGKLGTSLQADLCVNTVGDLLQFSKEKLQE 198
           KQLGGKLGTSLQ DL V+TVGDLLQFS+ KLQE
Sbjct: 251 KQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQE 283



 Score = 45.4 bits (106), Expect(2) = 7e-14
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
 Frame = -2

Query: 189 TWLCNIARGICGDEVKGRLLPQS----------RALKAIYVVQKXXXXXXXXXXXXXXXX 40
           TWL NIARGI G+EV+GRLLP+S          RALK++  VQ                 
Sbjct: 291 TWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSD 350

Query: 39  XEQNRRLCKCL 7
            EQN+R+   L
Sbjct: 351 LEQNKRIASTL 361


>ref|NP_568638.2| DNA polymerase eta subunit [Arabidopsis thaliana]
           gi|23954185|emb|CAC94893.1| putative DNA polymerase eta
           [Arabidopsis thaliana] gi|332007772|gb|AED95155.1| DNA
           polymerase eta subunit [Arabidopsis thaliana]
          Length = 672

 Score = 56.2 bits (134), Expect(2) = 7e-14
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 296 KQLGGKLGTSLQADLCVNTVGDLLQFSKEKLQE 198
           KQLGGKLGTSLQ DL V+TVGDLLQFS+ KLQE
Sbjct: 251 KQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQE 283



 Score = 45.4 bits (106), Expect(2) = 7e-14
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
 Frame = -2

Query: 189 TWLCNIARGICGDEVKGRLLPQS----------RALKAIYVVQKXXXXXXXXXXXXXXXX 40
           TWL NIARGI G+EV+GRLLP+S          RALK++  VQ                 
Sbjct: 291 TWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSD 350

Query: 39  XEQNRRLCKCL 7
            EQN+R+   L
Sbjct: 351 LEQNKRIASTL 361


>ref|NP_851130.1| DNA polymerase eta subunit [Arabidopsis thaliana]
           gi|13430742|gb|AAK25993.1|AF360283_1 putative
           DNA-damage-inducible protein P [Arabidopsis thaliana]
           gi|21280927|gb|AAM44927.1| putative DNA-damage-inducible
           protein P [Arabidopsis thaliana]
           gi|332007771|gb|AED95154.1| DNA polymerase eta subunit
           [Arabidopsis thaliana]
          Length = 588

 Score = 56.2 bits (134), Expect(2) = 7e-14
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 296 KQLGGKLGTSLQADLCVNTVGDLLQFSKEKLQE 198
           KQLGGKLGTSLQ DL V+TVGDLLQFS+ KLQE
Sbjct: 167 KQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQE 199



 Score = 45.4 bits (106), Expect(2) = 7e-14
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
 Frame = -2

Query: 189 TWLCNIARGICGDEVKGRLLPQS----------RALKAIYVVQKXXXXXXXXXXXXXXXX 40
           TWL NIARGI G+EV+GRLLP+S          RALK++  VQ                 
Sbjct: 207 TWLWNIARGISGEEVQGRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSD 266

Query: 39  XEQNRRLCKCL 7
            EQN+R+   L
Sbjct: 267 LEQNKRIASTL 277


Top