BLASTX nr result

ID: Scutellaria24_contig00021480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00021480
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   127   7e-28
gb|AAN60309.1| unknown [Arabidopsis thaliana]                         127   7e-28
ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   126   2e-27
ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thali...   124   1e-26
ref|XP_004134548.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   121   5e-26

>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 53
           M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 52  SQFSSHEPGVTHVLVTG 2
           S FS HEPGVTHVLVTG
Sbjct: 61  SVFSRHEPGVTHVLVTG 77


>gb|AAN60309.1| unknown [Arabidopsis thaliana]
          Length = 419

 Score =  127 bits (320), Expect = 7e-28
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 53
           M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 52  SQFSSHEPGVTHVLVTG 2
           S FS HEPGVTHVLVTG
Sbjct: 61  SVFSRHEPGVTHVLVTG 77


>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/77 (76%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 53
           M +F R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1   MFNFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 52  SQFSSHEPGVTHVLVTG 2
           S FS HEPGVTHVLVTG
Sbjct: 61  SVFSRHEPGVTHVLVTG 77


>ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 418

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/77 (77%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 53
           M SF R R+Q R NRSMSLGG+DYADPKKKNNY GKI++ ++LTALCI MLKQSP FNTP
Sbjct: 1   MFSFGRARSQGRQNRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTP 60

Query: 52  SQFSSHEPGVTHVLVTG 2
           S FS HEPGVTHVLVTG
Sbjct: 61  S-FSRHEPGVTHVLVTG 76


>ref|XP_004134548.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]
          Length = 412

 Score =  121 bits (304), Expect = 5e-26
 Identities = 58/77 (75%), Positives = 65/77 (84%)
 Frame = -1

Query: 232 MLSFNRIRTQQRSNRSMSLGGMDYADPKKKNNYCGKIIMVSTLTALCILMLKQSPNFNTP 53
           ML+F R RTQ RSNRS+SLGGMDY+DPKKKNN  GK I+ +TLTALCI+MLKQSP F+ P
Sbjct: 1   MLNFGRSRTQPRSNRSLSLGGMDYSDPKKKNNVVGKFILAATLTALCIIMLKQSPAFSAP 60

Query: 52  SQFSSHEPGVTHVLVTG 2
           SQF   EPGVTHVLVTG
Sbjct: 61  SQFGVREPGVTHVLVTG 77


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